| Item | Value |
|---|---|
| gene id | XLOC_016107 |
| gene name | dlg1l |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 4900213 ~ 5074812 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| id | name | namespace |
|---|---|---|
| GO:0099645 | neurotransmitter receptor localization to postsynaptic specialization membrane | biological_process |
| GO:0098609 | cell-cell adhesion | biological_process |
| GO:0007268 | chemical synaptic transmission | biological_process |
| GO:0097120 | receptor localization to synapse | biological_process |
| GO:0007015 | actin filament organization | biological_process |
| GO:0045197 | establishment or maintenance of epithelial cell apical/basal polarity | biological_process |
| GO:0043113 | receptor clustering | biological_process |
| GO:0030866 | cortical actin cytoskeleton organization | biological_process |
| GO:0045930 | negative regulation of mitotic cell cycle | biological_process |
| GO:0001935 | endothelial cell proliferation | biological_process |
| GO:0009790 | embryo development | biological_process |
| GO:0098839 | postsynaptic density membrane | cellular_component |
| GO:0043005 | neuron projection | cellular_component |
| GO:0031594 | neuromuscular junction | cellular_component |
| GO:0008328 | ionotropic glutamate receptor complex | cellular_component |
| GO:0030054 | cell junction | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016323 | basolateral plasma membrane | cellular_component |
| GO:0019901 | protein kinase binding | molecular_function |
| GO:0019902 | phosphatase binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-050222-3 | Predicted to enable phosphatase binding activity and protein kinase binding activity. Predicted to be involved in several processes, including actin cytoskeleton organization; negative regulation of G1/S transition of mitotic cell cycle; and protein localization to membrane. Predicted to be located in plasma membrane. Predicted to be active in several cellular components, including basolateral plasma membrane; neuromuscular junction; and postsynaptic density membrane. Is expressed in retina; spinal cord; and tegmentum. Human ortholog(s) of this gene implicated in invasive ductal carcinoma. Orthologous to human DLG1 (discs large MAGUK scaffold protein 1). |
| ensembl_id | ENSDARG00000102216 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00031794 | False | 6958 | mRNA | 0.45 | 25 | 4900213 | 5074812 |
| TCONS_00031795 | False | 2964 | mRNA | 0.53 | 22 | 4903514 | 5014939 |
| TCONS_00031796 | False | 2598 | nonsense_mediated_decay | 0.51 | 22 | 4903560 | 5014629 |
| TCONS_00031797 | False | 672 | mRNA | 0.50 | 8 | 4907374 | 4925025 |
| TCONS_00031798 | False | 614 | processed_transcript | 0.50 | 8 | 4907796 | 4925127 |
| TCONS_00031799 | False | 796 | processed_transcript | 0.53 | 6 | 4942960 | 4984404 |
| TCONS_00031800 | False | 890 | processed_transcript | 0.39 | 2 | 5040167 | 5043850 |
| TCONS_00031801 | True | 183 | mRNA | 0.46 | 2 | 5070918 | 5071888 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_016106 | tfr1a | coding | downstream | 25247 | 4849269 ~ 4874966 (-) |
| XLOC_016105 | CU929154.1 | coding | downstream | 85941 | 4812694 ~ 4814272 (-) |
| XLOC_016104 | tnk2b | coding | downstream | 102701 | 4729155 ~ 4797512 (-) |
| XLOC_016103 | CABZ01063651.1 | coding | downstream | 257806 | 4631335 ~ 4642407 (-) |
| XLOC_016102 | FO704866.1 | coding | downstream | 329110 | 4571013 ~ 4571103 (-) |
| XLOC_016108 | ptmab | coding | upstream | 57152 | 5131964 ~ 5135125 (-) |
| XLOC_016109 | phb2a | coding | upstream | 103360 | 5178172 ~ 5199431 (-) |
| XLOC_016110 | MFN1 | coding | upstream | 263947 | 5338759 ~ 5356686 (-) |
| XLOC_016111 | si:ch1073-184j22.2 | coding | upstream | 322252 | 5397064 ~ 5404466 (-) |
| XLOC_016112 | wdr33 | coding | upstream | 335620 | 5410432 ~ 5443745 (-) |
| XLOC_016100 | NA | non-coding | downstream | 781398 | 4114011 ~ 4118815 (-) |
| XLOC_016095 | NA | non-coding | downstream | 1380047 | 3519583 ~ 3520166 (-) |
| XLOC_016092 | CU633991.2 | non-coding | downstream | 1484006 | 3412076 ~ 3416207 (-) |
| XLOC_016113 | NA | non-coding | upstream | 374969 | 5449781 ~ 5453522 (-) |
| XLOC_016118 | NA | non-coding | upstream | 626286 | 5701098 ~ 5702648 (-) |
| XLOC_016123 | NA | non-coding | upstream | 764084 | 5838896 ~ 5840494 (-) |
| XLOC_016138 | CABZ01077605.1 | non-coding | upstream | 1691481 | 6766293 ~ 6766407 (-) |
| XLOC_016139 | CU694525.1 | non-coding | upstream | 1800939 | 6875751 ~ 6919316 (-) |