XLOC_016110 (MFN1)


Basic Information

Item Value
gene id XLOC_016110
gene name MFN1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 5338759 ~ 5356686 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031804
ATGGAGCAGGATGGTGTTTCACCATTACAGCACTTTGTTGTGGCGAAGAAGACAATCAGTGCTTTGTTTCACCAGCTGCTGGAGTTTGTTAAAGAGGGATCCGATTTTGTGGAAGACACGTGGAGGAGTGAAGACCTGGATAATGTTGCTGAGGAGGATCAGTGTCTGCAGATCCAGACCTGCTTCAGGAAACTCACCGTCATCAAAGACGTGCTGGACCGCAGACATATGAAGGTGGCTTTTTTTGGCAGGACCAGTAATGGAAAGAGTACTATAATCAATGCCATGCTGAGGGAGCGGGTTCTGCCCAGTGGAATCGGCCACACCACTAACTGCTTTCTGAGTGTGGAGGGCACAGATGGAGAACAAGCCTACCTGACCACTGAAGACTCGGAGGAGAGGAAGGGTATTGAGACAGTCAATCATCTGGCTCACGCTCTGCATATGAACAGGAACCAGGACTCAGGCTGTCTGGTTCGAGTGTTTTGGCCTAAAACCAAGTGTGTCCTGCTGAGAGATGACCTGGTCTTGATGGACAGTCCAGGAATAGACGTCACATCAGAGCTGGACAGCTGGATCGACAAGTTCTGTTTAGACGCTGATGTGTTTGTGCTTGTGGCGAACTCTGAGTCTACCATCATGAACACTGAAAAGCACTTTTTCCACAAAGTGAACGAGCGCATATCCAAACCCAACATTTTCATCCTGAACAATCGCTGGGACGCGTCTGTCTTAGAGCCAGAGTATCTGGAAGATGTGCGGAAGCAGCACATGGATCGTTGCGTCAGTTTCTTAGTGGACGAGCTTAAGGTAGTGGACCTAAACAAGGCACCTGACCGCATCTTCTTCGTCTCTGCCAAAGAAGTGCTCAGTGCCAGGATCCACCGTGCCCAGGGAATGCCAGAGACTGgcgGAGCTTTGGCTGAAGGATTCCAAGAGCGACTGATGGAGTTCCAGAGTTTTGAAAGAAcatttgagGAATTTATATCGCAGTCTGCCGTCAAGACCAAGTTTGAGCAGCACACAATCCGAGCCTGGCAGATCATTGAGTCGGTCAAGGCTATCATGGATGCCATCAATATTTCTTCGGCAGAAAAGAAAGTTTTCTCGCTGGAAGATCGCGAGGCTCTTATGGACCGGCTGGAGTTTGTACGTAATCAGCTGAACTTCATAACCGAGGACATCAAGGACAAGATAAAGGTCGTCAGTGATGAAGTGGCTGCCAAGGTGaccagcatcatcatcatcaccccTCACAAAAGGCCAACCCTAGTGTACACAAATACAGAATATGGAGTTATTTTGATGCTACATTAG

Function

symbol description
mfn1 Enables GTPase activity and identical protein binding activity. Involved in GTP metabolic process; mitochondrion localization; and organelle fusion. Located in mitochondrion. Is integral component of mitochondrial outer membrane. Part of outer mitochondrial membrane protein complex. Biomarker of Alzheimer's disease.

GO: NA

KEGG:

id description
ko04137 Mitophagy - animal
ko04621 NOD-like receptor signaling pathway
ko05012 Parkinson disease
ko05022 Pathways of neurodegeneration - multiple diseases
ko03029 Mitochondrial biogenesis

Ensembl:

ensembl_id ENSDARG00000011884

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031804 True 1317 mRNA 0.49 10 5338759 5356686

Neighbor

gene id symbol gene type direction distance location
XLOC_016109 phb2a coding downstream 139328 5178172 ~ 5199431 (-)
XLOC_016108 ptmab coding downstream 203634 5131964 ~ 5135125 (-)
XLOC_016107 dlg1l coding downstream 263947 4900213 ~ 5074812 (-)
XLOC_016106 tfr1a coding downstream 463793 4849269 ~ 4874966 (-)
XLOC_016105 CU929154.1 coding downstream 524487 4812694 ~ 4814272 (-)
XLOC_016111 si:ch1073-184j22.2 coding upstream 40378 5397064 ~ 5404466 (-)
XLOC_016112 wdr33 coding upstream 53746 5410432 ~ 5443745 (-)
XLOC_016113 NA coding upstream 93095 5449781 ~ 5453522 (-)
XLOC_016114 proca coding upstream 99855 5456541 ~ 5475921 (-)
XLOC_016115 saga coding upstream 123439 5480125 ~ 5505094 (-)
XLOC_016102 FO704866.1 non-coding downstream 767656 4571013 ~ 4571103 (-)
XLOC_016100 NA non-coding downstream 1219944 4114011 ~ 4118815 (-)
XLOC_016095 NA non-coding downstream 1818593 3519583 ~ 3520166 (-)
XLOC_016092 CU633991.2 non-coding downstream 1922552 3412076 ~ 3416207 (-)
XLOC_016118 NA non-coding upstream 344412 5701098 ~ 5702648 (-)
XLOC_016123 NA non-coding upstream 482210 5838896 ~ 5840494 (-)
XLOC_016138 CABZ01077605.1 non-coding upstream 1409607 6766293 ~ 6766407 (-)
XLOC_016139 CU694525.1 non-coding upstream 1519065 6875751 ~ 6919316 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000003_00431473_00447759 MFN1A coding CI01000003 null 431473 ~ 447950 (+)