XLOC_016121 (nyap2b)


Basic Information

Item Value
gene id XLOC_016121
gene name nyap2b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 5734870 ~ 5776030 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031826
GCCCGTGTTAATCTGCTGTGGCATCCACTCAGAGACGAGCCTTACATCCGAGAACCAGCGTTGCCGTGAGGTGCCCACACGCAAGTGCGTCcttccaaaacaacaacaaccaaaagaAGAAGATCAATTCCTAAGAGTGCATGATTGATTCAAGATTTCAGGagcttttcttttgtttgtttttcttttttgtgcagGACTTGGATTGAAGTTTTGGAAGGAGGTTTTTCTCAGGTGATATTATTGTGCACGTTTAACATGCACAGATGAAGAAGAGAGCATCTATCGGGCTGGAGTTGCATGCTGAAGGTGCTGAAGGTTGTAGCGTCGACTCCTGATTTTATGCACAGGAATACAACTTTTGCGAACTGTAGCATCACTTTGCAATGGCCCGAGTCTTTCCGGGTGGCACTGCAGAAGGGATCTCTGGATATCAGTTGGGTTTTTGGTCCCAGGGTCTCTAAATGGATCTATCTGATTTGGTTGGCGCAGTAGCCTGCAGGGACGAAGTTCTTCTAATGCCCTGCTGGAATGCCTGTGAGCAATGATTAGCTCTAAAGAGGAGGATTCGCTAATGTTTATGCAGTATGTGGAAGACTGTGGACTAAGAGCATATAACAGATTGGTCACGCATAACATCGACCAAGTGTGGAATGAGAAAAGCAAGATTAACTTTCAGGAGAAAAACGACAAGAAGCGAAAGCAGGAAGAAGCCATTAAAAGGGGGGAAGAAGTGGTCACTGAGGGCAAGCACCTGCGAATGGGCTCAATGAGCATGCCGGCCCCTGCGGAGCACATGTCCCCTCACCAGCACCAGCACCCCTGTAACCCGGGCTTCAGCGTCCGCTCCCAGTCCCTGCACTCGGTGGGAGGGTTGGAAGAGGAGGGAAGCCCCACATCCCGTAAGCAGCCCCCACCCAAACCCCGGCGGGACCCCAGCACAAAACTCAGCATCTCCTCTGAAGCGGTGGACATCAGTCCCACTTACTGTAAAGGCGATGAATCAGAGAGGTGTGATGGAACACAAGGTTGCAGTGAGGACTGCAGGAAAGTTCCCCCACCGAAACCTAAGAGGAATCCCAACACACAACTGAGCACTTCCTTCGATGAATCTTACATCCGCAGTAATGGTTCAAAAGGTTCGACCACAATGCTTTTCTCAAGAGATGGCCAAACGCCTTCTCCTCAGCCACAGGACTTGGATGAACCTGTCTACATTGAGATGTCAGGGAATGTGGGCCAGGAAGCCACCCCTCGTACTGAGGAGGATGAGCCAGGCGAGGCTGTCTATGAAGAGATGAAGTATCCTGCACTTGACGAGTATGACTCGCGTTGGGATCTTGTGAACTGTCGATCACTGTGTGTCACACCTTGCCCAAGTGAATCTGAAATCTATACCCCTCTGAGCCGTTGTACCACCCCTAGAGGAGTGCCCCTCTGTGATATCCCTGCCCCTTTCCCTAACCTGCTGTCTCACAGGCCCCCTTTACTGGTTTTCCCTCCAGCCCCAGCTCAGTGTTCTCCCAACTCGGACGAGTCCCCGCTTACCCCACTTGACGTAGCAAAGCTTCCTATGTTTGAGAATGGCTCTTTTGGCAAGTCCCCAACGTCATCTTCTTTGGAACCCTCCGGCTCGGCCTCGACGTCGCACATGAGGCGTGCTGAAAGGGAGCTAACAGCAACTCCTACAATAACAGCATCTGGACGTTCGTCCGCACCACCATTGCCCTGTGCCCTCTATAAAAGTTCCTCCTCTTCATACAGTTACCAGCGCAGCCACTCGGCCTGCCCCTCACCAGTCAGTATGGGCCGCTGCCTGACGCCCCTCAGCCTCATGCGCTCACCACCTATTGATGGACCATTTTCTGCATCAGGCCTTCCTCGCAGCGCCTCCGCCACACCTCACGGAAAGGCGTCTCCACCGCAGGACGCAAGCTCAGGGGGACGCCATCATGGCTCCATGCAGAACGTCTCAGTGGCTCGCTCACGGACGCCCACCAGCCCATTGGATGAACTCACCAACCTCTTCACCACTGGCAGGAACATGCTGAAGAAGAATACCAGTGGCAGAAAGAGCAAGGAACCAGGAGAAAATGAATCCAAGGGAAAGAGTCACAGTTCTGAGTCCAAACGAGAGCACAAGGAGAGAAGCCATCACAGCAAGGAATCCAAGCGAGATAAAGACCGTAGCAGCAAGTCCTCTCATCGCCGGGAGGGCAAAGACAAAGAACCAAATGGCACTGAAGCCTCATCTCGGCATGACTGCAGGGACTGTGGCTTCAACACTACTGATCCGTTAGCCAGAAGAGACAGCAAGGACAGAGGTTGTAATGGACCAGAGTTGCCTCCTCGGCAAGAGAGCCAAGATCGAGGCTGTAGCACTGAGGCACTGCCTCGACGGGATAGCAAAGACAGAGGCTGTAACAGTGCAGAACCCATCATCAGAAGGGATAGCAAAGACAGGAGCTGCAGCGGTGCAGAATTGACCACTAGACGGGACAGCAAAGACAGGAGCAGCAATGGTGCAGAACCGATCATAAGACGGGACAGTAAAGACAGGAGCTGCAACGGTGCAGAACCGATCACAAGACGGGATAGTAAAGATAGGAGCTGCAATGGTGCAGAACCGATCACAAGATGGGACAGCAAAGACAGGAGCAGCAACGGCACAGATCCGATCATCAGACGGGACAGTAAAGACAGAGGCTGTATAGGACCAGAACTCTTGGCCAGACAAGATAGTAAGGAACTGCTAAGAAATGGTCTAGAGACCAGGCGGGACAGCAGAGAGAAAGCTTGCTATGGGATAGAACTTCCTCCCAGACATGAAAATAAGGACCTGGGCAGAACAGGCTTGGAGAGTCGGCGAAACAGTAAAGAAGGTTCCAAGCATAGCACAGAATCTGTTCAGGACAAGGAGAAAAGCAACCACAGTGCAGAGAGCTGGTGGGGGAGCAAGGAAAGGATCAGCAATGGCAATGATGTCAGGCGAGAATGCAAAGATAAAGGAGTACGCACAAGTGATCCAAAAGATAGAAGCAACTGTAGCACAGAATCACCCAAAGCACAGGACAAAAGGTCTGGATCTTCAGCCATGGTGGCTTCAAGTTGGTCTGCTGGAAGATCCTCCATGAGTCCAAATAATGTGCTGGGAAACTCGGACCTGAAGATGGTTCTAAAGGAAGGACGGCCTTCCTCGACACCAGTAGCATCATCACCAAAAGGCACACCTCAAAGACAGCCTCCTGATGTCCAGCAGATGCCCCCCATGCCATGGTTATGCGGCGATAGCACAATGCTGGAGATGATAGAAAAGAAACAACGCCTCTGTCGAGAGATACGCTCCCGTCAGCGACTTCCTGACTGCAGTCCATGCAAGAAAGAGAGCCTGCCTATCATGCCCAGCTGGAAGAAAACAAACGGCCTGAAGAAGTACAGCCCCCCTCCATACCCCACTCAGACCACAGTCTTCTGGGACACAGCTATTTGACTCTCGAGAGTGCTTCGGGACCACGCTTTGCCTTTTATTATCAGGCAGAGTCGAGTGTGCTTCCTCCAGAAGACGAGTGTGTGGGGTTATAATAGCAATATTTCAGAGGTTGCAGTTTATGGGTTTTCATATCATTGTTGATAGCTAATATTTTTATACTCAATGTGACTCTATGACCTAGCATCTatagatattttctaaatgaaatgaaatatctTTGTAAAGATTATGTAGGGTTAGTCCAATGCAATTGCTGTTTTTCTACCTTTaatttatttcgttttttttttaaacatcacagCACAGTACCTTTTCATCAGTAGCTTTGACTTGccttttttgtcatattttaccACACTGAATGAAGTCTAATTTAACATTGGATGTTATGACGATTTGACCAGGGCTAGCTTACTCATCTGCTGCCTTTCCGCATATTATTGGATACTTTAATTGAATGTCTAATGTTAAGAACAGATGAAAGTCCTTCTTAAAGGATCTCATTGCTATTAACCACATTCTTCTTTAGTTTCTGTAGTCATTTACAGTAAGTGGTAGGTTTCAGAGAACACGACTTACTCTAAGGTCAGGTCAATGCACATAGAATAAgggtaacagtttttttttttactgtatgatACAGAACACGTCTACTTTAAGGGATGTTCTCACGTGTAAAACCGAGGGGCGAACTTCTCCTCTTTGGGTCTGTGGCAATAGCTGGCCAGTGCCAGTGGAAATCCTCCAAAGTGCACATCAAGGATGGTTACCCAGAGATTAATGACAATCGGAAAtattaaagttgtattttttGCATCTCAGTATTAATCATGTACATGGACAGTTGTGAAATGCGAATTCTTTTTGAGCAGTGGTCTTGTATAGAATGACTGTGCCATTATTTATGATAAGTTATTGGGTTAGATCGATTAAAGAGTTCAGGCAGACGCAAATATTTGTATTAGCAACATAAACCAATGACCGATAGCCCTCAGCTATTGTAAGTATATAGTAGCCATGGCCTAATAGCCAGGTCAAGTCAAAGAAAGAGACTGTACAACACGAGAGAGCTACAACTCTACAATCCTCTACCACGTGACTGGATACCTACATTATCCCTCTACCTCAACCTCAATCAGTGGTCAATCATTTGCACAACCAATGCAATCAATCTGCATTGCCAAACAACTTAAATTCCCCCCTTCACTGTATAAACCaattgactcaacttaaaattgtgagGCAACTTGCCGCAGAGCTTTTTGAGTTGACTCGAGTCAAGTgcagtacagtggtccctcgccatAACGCGGTTCACTTTCACGGTC

Function

symbol description
nyap2b Predicted to act upstream of or within neuron projection morphogenesis and phosphatidylinositol 3-kinase signaling. Orthologous to human NYAP2 (neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2).

GO:

id name namespace
GO:0048812 neuron projection morphogenesis biological_process
GO:0014065 phosphatidylinositol 3-kinase signaling biological_process

KEGG: NA

ZFIN:

id description
ZDB-GENE-070705-169 Predicted to act upstream of or within neuron projection morphogenesis and phosphatidylinositol 3-kinase signaling. Orthologous to human NYAP2 (neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2).

Ensembl:

ensembl_id ENSDARG00000093357

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031826 True 4818 mRNA 0.48 7 5734870 5776030

Neighbor

gene id symbol gene type direction distance location
XLOC_016120 sst2 coding downstream 5975 5726353 ~ 5728895 (-)
XLOC_016119 cwc25 coding downstream 11084 5709424 ~ 5723786 (-)
XLOC_016118 NA coding downstream 32222 5701098 ~ 5702648 (-)
XLOC_016117 parla coding downstream 173851 5543901 ~ 5561019 (-)
XLOC_016116 cldn15la coding downstream 217432 5508542 ~ 5517438 (-)
XLOC_016122 mier1b coding upstream 35452 5811482 ~ 5836116 (-)
XLOC_016123 NA coding upstream 62866 5838896 ~ 5840494 (-)
XLOC_016124 tmem125b coding upstream 157872 5933902 ~ 5942355 (-)
XLOC_016125 scp2a coding upstream 229169 6005199 ~ 6039757 (-)
XLOC_016126 czib coding upstream 266009 6042039 ~ 6051836 (-)
XLOC_016113 NA non-coding downstream 281348 5449781 ~ 5453522 (-)
XLOC_016105 CU929154.1 non-coding downstream 920598 4812694 ~ 4814272 (-)
XLOC_016102 FO704866.1 non-coding downstream 1163767 4571013 ~ 4571103 (-)
XLOC_016100 NA non-coding downstream 1616055 4114011 ~ 4118815 (-)
XLOC_016138 CABZ01077605.1 non-coding upstream 990263 6766293 ~ 6766407 (-)
XLOC_016139 CU694525.1 non-coding upstream 1099721 6875751 ~ 6919316 (-)
XLOC_016140 CU693440.1 non-coding upstream 1132632 6908662 ~ 6908681 (-)
XLOC_016141 AL953893.1 non-coding upstream 1304272 7080302 ~ 7080925 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000128_00152452_00161855 NYAP2B coding CI01000128 null 152452 ~ 161855 (-)