XLOC_016139 (CU694525.1)


Basic Information

Item Value
gene id XLOC_016139
gene name CU694525.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 6875751 ~ 6919316 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031852
gaagtcttgtgcTGCCCTGGTTAACACTATTGAGCTGTTCTCTACATTGCCTGCTTTCACGGTGCTTACTTTGTCTTGTTCTCTGACCTCGTCCTGCCAGCTGCCTGCCTTGTACCTCAGCCTGATTACCGACTCTGATCCTAGCtgcctgccttgaactctagcctggaTACAGACCTTGATATTCGCCGCCTGCCTCCATGCCTGAACATTCATACTGTGATTACCTGCCGTTACTCCTTCAACGTAACACtattgtgtttgatCAACAACCGGATTCATGTGGTGCGGACCAAGAAATGAAGGCAGGTCAAAGGCAGGTGTCCATGGAGAACTTGTGTTCAGCCATCAGCAGctttcataGCATCCCTGTCCCtagtggacacacacacaagagCCAAGAACTTATTTTGTGAAATGGAAAGCTGCAGGTCTCTGGAGCTTTGCTTCCTGTTCTCTAAAACAATGGAAAAGATGAAGTAGGAATTGTGAACTATAATGCTGTTTCTATTGAAATCAATGCTTCTCTGGAAATTGGCTCATTCATCAGAACAATTCAGCCGCACAATGTATAATCACGATAAGCAGATACTGACGTGAAGACCACATCGTTTTCTAGGTTAAAGATTGTATAATCCTAGTTATGATGCAACTTGTTGAATAGCTCATCAGTATTGAAACGAAATGTCTGTGTATGAGCTGAAAAGGACACATGATGCCAAACTAATGGTGCCAAGACCAGAGTGAAAAAGGTTTAAAGAGCTCCTTTTCTCACCTATAATTGGGTCACATGAAGATCGATATTGAATAAAGAACCCTTGAGtcgtg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096763

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031852 True 828 lncRNA 0.44 3 6875751 6919316

Neighbor

gene id symbol gene type direction distance location
XLOC_016138 CABZ01077605.1 coding downstream 109344 6766293 ~ 6766407 (-)
XLOC_016137 rgs18 coding downstream 326913 6535865 ~ 6548838 (-)
XLOC_016136 rgs1 coding downstream 356734 6511499 ~ 6519017 (-)
XLOC_016135 rgs13 coding downstream 393511 6475567 ~ 6482240 (-)
XLOC_016134 si:dkey-119f1.1 coding downstream 501922 6321623 ~ 6373829 (-)
XLOC_016141 AL953893.1 coding upstream 160986 7080302 ~ 7080925 (-)
XLOC_016142 extl2 coding upstream 201266 7120582 ~ 7131691 (-)
XLOC_016143 rc3h1b coding upstream 230272 7149588 ~ 7189594 (-)
XLOC_016144 zgc:153115 coding upstream 319233 7238549 ~ 7246848 (-)
XLOC_016145 si:dkeyp-106c3.2 coding upstream 368781 7288097 ~ 7289403 (-)
XLOC_016123 NA non-coding downstream 1035257 5838896 ~ 5840494 (-)
XLOC_016118 NA non-coding downstream 1173103 5701098 ~ 5702648 (-)
XLOC_016113 NA non-coding downstream 1422229 5449781 ~ 5453522 (-)
XLOC_016105 CU929154.1 non-coding downstream 2061479 4812694 ~ 4814272 (-)
XLOC_016146 NA non-coding upstream 483175 7402491 ~ 7431590 (-)
XLOC_016147 FO203364.1 non-coding upstream 568276 7487592 ~ 7494464 (-)
XLOC_016148 NA non-coding upstream 627370 7546686 ~ 7548019 (-)
XLOC_016156 NA non-coding upstream 996035 7915351 ~ 7916387 (-)

Expression


Co-expression Network