XLOC_016162 (CT027589.1)


Basic Information

Item Value
gene id XLOC_016162
gene name CT027589.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 8634240 ~ 8635132 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031892
GTCGAAAAAATCACGCACTGCTCATGCTCTGCTcatgcttgcggtgtgaaacaggcttatgctaacacaggctcattttgtgttatgaatatacactcacctgccatttcattaggtacacctgtccagcttgttacgcaaatatctaatcagccattcacatggcagcaactcacagcatttgggcatgtagacatggtcaagacgatctgctgcagtttaaatcaagcattagaatggggatgaaaggtgatttaagtgactttgaacgtggcatggttgttggtgccatgaaaggcaacagtaactcaaataaccactagttgcaactgaggtctgcagaagagcatctcctaacacacaacacatccaaccttgaggccagggGCGGATAGGCAACAGCAGgaaaagaccacactgggtgctgGGGGGTGAGTTAGGACGAATCTAAGGGCCCATACATTTAGGGGAGCCCCTAAAACATTATCAAGGGCCCGTGCCGAACCtcaccccgctcttcacttttagacttttagacttttattttaaatgatgacctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000092893

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031892 True 700 processed_transcript 0.42 2 8634240 8635132

Neighbor

gene id symbol gene type direction distance location
XLOC_016160 si:ch211-71m22.1 coding downstream 22565 8586415 ~ 8611675 (-)
XLOC_016159 NA coding downstream 139524 8490588 ~ 8494716 (-)
XLOC_016158 pls1 coding downstream 522894 8059957 ~ 8111346 (-)
XLOC_016157 ephb3a coding downstream 616661 7923964 ~ 8017579 (-)
XLOC_016156 NA coding downstream 717853 7915351 ~ 7916387 (-)
XLOC_016163 si:ch211-71m22.3 coding upstream 9290 8644422 ~ 8648440 (-)
XLOC_016164 miga1 coding upstream 27976 8663108 ~ 8688759 (-)
XLOC_016165 NA coding upstream 200790 8835922 ~ 8840884 (-)
XLOC_016166 ak5 coding upstream 210708 8845840 ~ 9059955 (-)
XLOC_016167 st6galnac5a coding upstream 525815 9160947 ~ 9260002 (-)
XLOC_016148 NA non-coding downstream 1086221 7546686 ~ 7548019 (-)
XLOC_016147 FO203364.1 non-coding downstream 1139776 7487592 ~ 7494464 (-)
XLOC_016146 NA non-coding downstream 1202650 7402491 ~ 7431590 (-)
XLOC_016169 CR385076.1 non-coding upstream 771426 9406558 ~ 9406675 (-)
XLOC_016176 CU633992.1 non-coding upstream 1052923 9688055 ~ 9688185 (-)
XLOC_016178 NA non-coding upstream 1111305 9746437 ~ 9748216 (-)
XLOC_016181 BX470264.1 non-coding upstream 1227701 9862833 ~ 9863388 (-)

Expression


Co-expression Network