XLOC_016166 (ak5)


Basic Information

Item Value
gene id XLOC_016166
gene name ak5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 8845840 ~ 9059955 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031896
CACACAGTCGCTCCCTACATCAGCGCGCAGGTGTATCGCCTTGAGTTGGCGGTTTTAAACACTGAAGTGAGATACTGAGCAGGAGGGAGAGGTCGGCACTGCCAGCTAACATGCACAACGATATACTGAAAGTGTAGCTGTATTTATCCATTCACTTTAGTAGGGCTTGGAGGAGTCGCGACAACGTGAAACCTGCAACAGAGCGTTCAGTTTCTACACTCAGTGACGAGACTTTTCCCGAGGAAGACATGAACACCAACGATGCAAAGGAATATCTCTCCAGAAGGGAGATACCTCAACTCTTTGAGAGTCTGCTGACTGGTCTGATGTACTACCGCCCAGATGACCCTTTAGAATATCTAGAGACATGCCTTAAGAAAGTGAGGGATCTTGGTGGGACTGACAAAGTCCGGTGGGACACGTTCGTCGGGCAGGAGAAAAAGTCATTACCGCCTCTCAATGGTGGACAGTCACGCCGATCCTTTTTCCGAAATGTTCTCCCTGACAGTCCCAACTTTCCTTATCGGCGGTATGAGCGCCTCCCACCCATCAATCAGTTTTCCATCGAGAGTGACTCAGATTTGTCTGAGACAGCAGAGCTCATAGAGGAATATGAAGTTTTTGACCCATCTCGACCCAGACCCAAAGTCATCCTCATTATAGGTGGCCCAGGCAGCGGTAAAGGTACACAGTGTCTGAAGATTGCCGAGCGCTATGGCTTTGAATATGTCTCAGTGGGAGAGCTACTCAGGAAAAAGATGATCCACAATGCCACCAGCAACAGGAAATGGAGCCTGATTGCTAGGATAATCACCAATGGGGAACTGGCACCACAGGAAACCACCATAACTGAGATCAAGCAGAAGATCATGAAGATTCCCGAGGCCAGCGGTATAGTTATAGACGGCTTCCCGCGAGATGTGGGACAAGCACTTTCCTTTGAGGACCAGGTCTGTACTCCAGACTTGGTGGTGTTTCTGGCTTGTTCTAATCAGCGTCTGAAGGAGCGCCTGGAGAAACGAGCAGAACAGCAGGGTCGCCCAGACGACAACCCTAAAGCTATCGATCGACGCTTGACTAATTTCAAACAGAATGCCATCCCCCTGGTTAAATACTTCCAAGAAAAAGGCCTCATCGTCACAcTTGATGCAGATCGAGATGAAGAGGAAGTCTTCTATGACATCAGCATGACAGTTGACAACAAACTGTTCCCCACCAAAGAACCTGTGGCAGGACCCAGTGAACTCGACCTCAGTCTGATCGCAGACAGCAGCAGTCTGACAGATGTACCTGCCAAATTTGATGAGCAGGCTGATGAAGAGGTGGCTGAATATGCAGAGGCGATTGGAGAAAGTTTTCCAATGGAGACCAAGAAGTCAAAGGTCATCTTTGTGATCgGTGGGCCAGGATCAGGGAAAGCTCTCCAGTCAGAAAAGATAGAAGAGCGGTACAGTTTGAAGCGGCTGTGTCCCGGGGACATCCTGTGCAGTGAGCTGCAGTCTCACAGCGAGAGAGGACGCTTTCTCCGAGACCTTCTGGAAAGAGGAGAGCAGCTTCCCGAGGACACACTGCTGGATCTGTTGTGTGAGGCCATGGCATCTACTGTACGTCAGGGAAAGGGCTTCCTGGTAACAGGCTTCCCGAAGAATGAGAAGCAGGCGCAAGAATATGAAGCCAAGatgggCCAGCCAGACATAGTTCTGCTACTTGAATGTTCTGCAGACATCATGAGTCGACGGCTACAGCAGAGGGCCACCTGCAGCCTGCACAGTAAAGAAGCCCGAGACAGAGATACTCGCCGTAGAGTAGACGGGTTCTGCAGCCTGATCAATCCTGTGGTCGCTCACTATCAACACAGAGAATTTTTCCATAAGaTTGATGCTGAACAGCCCCCGGAAGACGTCTTTGAGCACATCTGCGTGGTCTTAGACTCCTGCTAGAGAGTTGGACTGGCACTGCCCCCTGGAGGACAGAAATATCACCTACACTTTCACTTCAGACTTACTCCACGGTACATTtccacgcacacacaaacaaacaaacaaacactcgcCTGCGATCAGCTTCTAAATGGTACACACACCCACTTGGAAAACTACCAACCAGCCACCGGCACCTGCTTATTTCACACTATCGCTGttcactgtaaatatatcaacccAACAAATCGGCAGTGTTTATCTCTTGGTATTGAACCTGTGCTGTGCTAATGCTTAAGCTAACTTTCAGctctataaaacacaaatgagGATCATTTATGGtgccgttttgctgtttttttggACTTGTTCTGTCAGTATCCTTGAGCAATGAAATTAGCAAACCTGATCAGCATGAAGGTCCAGCCGCTGGAGAGGCTTTGTGATTTATActtcatcatttatattgtgcCAAGCATGCCAGAATTGTGATTTGCTGTATATTTAATGCAGAAATGAATGAGCTGGAGATGGTTTGAATTTCACAGTCTGGCGTTCACACGGATCGATTTCACAATGAGGTCTGGTAACTGTATTCTTATTTATCAACCAAAGTGAAATAAAAGACATTTCATATGTT

Function

symbol description
ak5 Predicted to enable nucleoside diphosphate kinase activity. Acts upstream of or within cilium assembly. Predicted to be active in cytosol. Orthologous to human AK5 (adenylate kinase 5).

GO:

id name namespace
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0006163 purine nucleotide metabolic process biological_process
GO:0006165 nucleoside diphosphate phosphorylation biological_process
GO:0009142 nucleoside triphosphate biosynthetic process biological_process
GO:0060271 cilium assembly biological_process
GO:0016310 phosphorylation biological_process
GO:0005829 cytosol cellular_component
GO:0005737 cytoplasm cellular_component
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0004550 nucleoside diphosphate kinase activity molecular_function
GO:0016301 kinase activity molecular_function
GO:0019205 nucleobase-containing compound kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-8256 Predicted to enable nucleoside diphosphate kinase activity. Acts upstream of or within cilium assembly. Predicted to be active in cytosol. Orthologous to human AK5 (adenylate kinase 5).

Ensembl:

ensembl_id ENSDARG00000012555

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031896 True 2559 mRNA 0.48 14 8845840 9059955

Neighbor

gene id symbol gene type direction distance location
XLOC_016165 NA coding downstream 4956 8835922 ~ 8840884 (-)
XLOC_016164 miga1 coding downstream 157081 8663108 ~ 8688759 (-)
XLOC_016163 si:ch211-71m22.3 coding downstream 197400 8644422 ~ 8648440 (-)
XLOC_016161 si:ch211-71m22.5 coding downstream 209665 8617816 ~ 8636175 (-)
XLOC_016162 CT027589.1 coding downstream 210708 8634240 ~ 8635132 (-)
XLOC_016167 st6galnac5a coding upstream 100992 9160947 ~ 9260002 (-)
XLOC_016168 st6galnac3 coding upstream 270191 9330146 ~ 9489611 (-)
XLOC_016169 CR385076.1 coding upstream 346603 9406558 ~ 9406675 (-)
XLOC_016170 cope coding upstream 453205 9513160 ~ 9527210 (-)
XLOC_016171 slc25a24l coding upstream 469533 9529488 ~ 9544161 (-)
XLOC_016159 NA non-coding downstream 351124 8490588 ~ 8494716 (-)
XLOC_016156 NA non-coding downstream 929453 7915351 ~ 7916387 (-)
XLOC_016148 NA non-coding downstream 1297821 7546686 ~ 7548019 (-)
XLOC_016176 CU633992.1 non-coding upstream 628100 9688055 ~ 9688185 (-)
XLOC_016178 NA non-coding upstream 686482 9746437 ~ 9748216 (-)
XLOC_016181 BX470264.1 non-coding upstream 802878 9862833 ~ 9863388 (-)
XLOC_016199 CR450845.2 non-coding upstream 1845107 10905062 ~ 10905179 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000003_02259112_02344710 AK5 coding CI01000003 null 2259112 ~ 2344710 (+)