XLOC_016209 (impad1)


Basic Information

Item Value
gene id XLOC_016209
gene name impad1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 11633253 ~ 11648731 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031981
GCAGTGTCAGTCAGTTCGGCCCTGCCTGGCACAGCAGTGGACGTGGAATGCCGTCAATGTATCAGTCGCTGTCACCGTAATGGATCTGTCAACGTAAGAAACCAGACATTTATGCTTAGACCGCGGGATACACTGTGAGTCTATGAGGGAAGCGTTCGTTCCACCTAACCTGGATTTCGCCAGTGAAGGAAACAAGTGACTTTTGATTAGCTCGTAAGATATTTTCTCGTTTATGTTATAGCTGCGTTCAAATTATGCGCAGCAAAGAGAAACACGACTGGTAAAGCTGCTGTACTGTTCTCGCATTCCCCTGGCTTTGCTCGCACGTCTATAATTGCGATGGCTCCTATGGGCATCCGGCTGTCGCCGCTCGGCATAGCCGTGTTCTGTTTACTCGGGGTCGGTGTGATTTATCACCTGTACGCGGGGGTTTTGTCCAGCAGACTCGCCTTTTTCCGCCAGAAGAGGACCGTGGATCTGAGAGAGCTGCTGGCGCTGTCCATAGACGCTGCGGTGCAGGGCGGACGGGAGGTGAAGAGGATCCGGGAGGACAACACACTGGAGGAGAAGTCAAAGGGCAAAACGAAAGAAGGGGCTAGCGAGAAGTACACGCTGGGGGATCTCAACTCCCACCGCAAGATGTACTACCTGATCAAGAACACATTCCCTAATATACAGGTAAACTCAGAAGAGCACGCGAACGCTGAAGGTGAGGCCACAGTGTGGACACGAATGATCCCTGAAGATATTCTTGCTAAAGTCTCAGGCGGGAAGGAGATTCCTGCAGAAAAGATCACAGTCTGGATTGATCCACTGGACGCCACTCAGGAATACACAGAAAATCTCCTGAAGTATGTCACAACCATGGTGTGTGTGGCTGTGGACGGGGAACCTGTTATAGGTGTGATCCATAAACCCTTCACTGGGTACACAGTTTGGGGTTTTGTTGGAGAGGGATCCAATGTGGCTCCTCGTGATTCCTACAACACAAACTCTCCGAAGGTGATCGTCTCTCGCTCTCACGCGGGCAAAGTGAAGAGCTTCGTTCAGACGGCGTTCGGCAACAATACAGAAATCATACCAGCAGGGGGCGCAGGATATAAGGCACTGGCTCTCCTAAACCCCACTGATGACAAACAAGAGACTGCTGATATCTACATCCACGTCACATACATCAAAAAGTGGGATATCTGTGCGGGCGACGCCATCCTGAAGTCTCTCGGTGGTCAGATGACGACTCTGAAAGGAGAGCAGATTGATTACTCTGGGTTAGAAGGAAACAAGGGCGGTCTGTTAGCCAGCATGAAAGTCGATCACAAAGCATTGGTGAAAAGACTTCCACTCTGGGAAgacaacaaacaataataaatcaccaattctgttcataacaCTCCCATTTTCTTCGGTACCACATATTCGTTTAGAAATATGAAGATCCAACAGATTGCAAGAGGAAACGACTGATCCAACATCGCTGACTCTGGAATATGTGTAACAATACCCAAAACAAGTTTGAGATGTGTTTTATAGTAAGGATGTGTGCCTTTGGTTTGTACAGATCATTAATAATGCATTGTGCTACacatttaaagcgacagtacatccaaattaaaatttactcacaaTAAAGCTATCCAAGATGTA

Function

symbol description
impad1 Golgi-resident PAP phosphatase

GO: NA

KEGG:

id description
ko00920 Sulfur metabolism
ko04070 Phosphatidylinositol signaling system

Ensembl:

ensembl_id ENSDARG00000058114

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031981 True 1644 mRNA 0.48 5 11633253 11648731

Neighbor

gene id symbol gene type direction distance location
XLOC_016208 NA coding downstream 75129 11556975 ~ 11558124 (-)
XLOC_016207 penka coding downstream 120434 11508691 ~ 11512819 (-)
XLOC_016206 sdr16c5a coding downstream 128475 11483072 ~ 11504778 (-)
XLOC_016203 slc44a5a coding downstream 164599 11216814 ~ 11468654 (-)
XLOC_016210 MFF coding upstream 2445 11651176 ~ 11662923 (-)
XLOC_016211 CT573467.1 coding upstream 112095 11760826 ~ 11767204 (-)
XLOC_016212 abhd3 coding upstream 199779 11848510 ~ 11912347 (-)
XLOC_016213 CT573433.1 coding upstream 327530 11976261 ~ 11981305 (-)
XLOC_016214 kcnt2 coding upstream 370610 12019341 ~ 12079718 (-)
XLOC_016205 BX901918.2 non-coding downstream 295270 11337040 ~ 11337983 (-)
XLOC_016204 BX901918.3 non-coding downstream 301937 11330724 ~ 11331316 (-)
XLOC_016199 CR450845.2 non-coding downstream 728074 10905062 ~ 10905179 (-)
XLOC_016181 BX470264.1 non-coding downstream 1769865 9862833 ~ 9863388 (-)
XLOC_016216 CR376724.1 non-coding upstream 575692 12224423 ~ 12224539 (-)
XLOC_016218 NA non-coding upstream 1055226 12703957 ~ 12704384 (-)
XLOC_016219 BX908750.2 non-coding upstream 1171268 12819999 ~ 12821531 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000004_02906581_02908320 IMPAD1 coding CI01000004 null 2906479 ~ 2908320 (+)