XLOC_016218



Basic Information


Item Value
gene id XLOC_016218
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 12703957 ~ 12704384 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00033780
GCGGTGCACTGGCTGCAGAGTGCATTTGCTGCTTTGTCGTTTCAACGTGAATCTTCTCAACTCGCTACTGTCACAAATCCTGTCGGCACATCATTCACCGCGCGCGCGGTTGTGAGAATGGGTCATTCCCGGAAAGTGAATACTTGCATCGGATGTTGAGAGCTGACTAAATATTTTACCTTGGAGAACAACGCGGAAAAAGACAACTACAGTACTCACATCACCAACACGACGTGATACACTTATCATTGAACGCAAAACGTGACTTCTGACACATTATTAAGGGATGAACTCGTCTGCTGGAGCAGGGAATTACAGGAGAGGCTCAACCAAAGATGATA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00033780 True 341 lncRNA 0.47 2 12703957 12704384

Neighbor


gene id symbol gene type direction distance location
XLOC_016217 dpp6b coding downstream 71196 12406713 ~ 12632761 (-)
XLOC_016215 gpr158b coding downstream 460744 12104389 ~ 12243213 (-)
XLOC_016216 CR376724.1 coding downstream 479418 12224423 ~ 12224539 (-)
XLOC_016214 kcnt2 coding downstream 624239 12019341 ~ 12079718 (-)
XLOC_016213 CT573433.1 coding downstream 722652 11976261 ~ 11981305 (-)
XLOC_016219 BX908750.2 coding upstream 115615 12819999 ~ 12821531 (-)
XLOC_016220 NA coding upstream 479843 13184227 ~ 13216269 (-)
XLOC_016221 kdsr coding upstream 519371 13223755 ~ 13254821 (-)
XLOC_016222 vps4b coding upstream 551602 13255986 ~ 13333991 (-)
XLOC_016223 nmur1b coding upstream 671715 13376099 ~ 13382726 (-)
XLOC_016211 CT573467.1 non-coding downstream 936753 11760826 ~ 11767204 (-)
XLOC_016208 NA non-coding downstream 1145833 11556975 ~ 11558124 (-)
XLOC_016205 BX901918.2 non-coding downstream 1365974 11337040 ~ 11337983 (-)
XLOC_016224 NA non-coding upstream 846183 13550567 ~ 13573898 (-)
XLOC_016225 NA non-coding upstream 967728 13672112 ~ 13673864 (-)
XLOC_016227 CU657977.1 non-coding upstream 1079009 13783393 ~ 13786658 (-)

Expression



Co-expression Network