XLOC_016223 (nmur1b)


Basic Information

Item Value
gene id XLOC_016223
gene name nmur1b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 13376099 ~ 13382726 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032003
GATACAGTACAACTGCTCCTCTCCAAGTTCACTGTTCACAGTTGTTGTGAACACGTCATGGTGCTCCACCAAAGAAGAAGAATGTCAAAACAGAACAGCAAACCTATCAGACCTCTGTCTATCCCGCAGTGCCTACCTGGAGAAATACCTTGGACCCTGTCGTTCACCTTTCTTTCTGCCTATATGTGTCACCTACCTGCTCATCTTTGTAGTAGGTGTGGTGGGCAACATCCTAACTTGTATTGTCATTACCCGTCATCGCATCATGCGCACAACGACAAACTACTACCTGTTCAGCCTGGCCATTTCTGACCTCCTTGTGCTGTTGCTTGGCCTCCCGCTGGAGCTTTATGAGCTCTGGAGCAACTATCCTTTTCTGTTTGGAATTTCTGGCTGCTACTTCAAAACCTGTCTCTTTGAGACAGTCTGCTTTGCCTCTGTTCTCAATGTTACAGCCTTAAGTGCAGAACGTTATAGAGCTATCATTCATCCTCTGCACACCAAACATGTTGCGACGAGTGCTCATGCAAAGCGTGTTATCCTTGTGTTATGGGCTGTCTCTCTATTGTGTGCCTTGCCCAATACCAGTATTCATGGTGTGGAGATGTTAAAACCCCGTTTTGGACTTACTTTCCCAGAATCAGGTGTGTGTACAGTGGTACACGATAGGTGGATCTACAACCTGCTGGTGCAAGTGACAGCACTGCTGTTCTTCATACTGCCGATGCTGACTATCAGTGTGCTGTATGTGCTGATTGGCCTACAGCTGCACCGGGAAAGGGAGTGCTTTGATTCAAAGATCGTGCTCAATCAGGATGGGGTCAATCAGAGGGCACGTCATCGACAAGTCACAAAAATGCTTTGTGCATTGGTGATTGTGTTTGGAATCTGCTGGGCTCCCTTTCACATTGATCGTGTAATGTGGAGCTATATTGATGACTGGACTGCAGAGAACCACCACATCTTTGAGTATGTGCATCTTCTATCTGGTGTCTTCTTCTACTTGAGCTCAGTGGTCAATCCCATCCTGTATAACCTCATGTCTTCGCGCTTCAGAGAAATGTTCCGTGAGGTGGTGTGTCAAAAAGACCATCGTCAGCTCTCAATGAGTAGGGTCACATTACGTAGTGTTGTTTCTGCCTCTTTTTCTGCCTCCAATACAGTCTCATTTTCTGTAAAGTTCAACCCACGTGAGCTGccacacacactct

Function

symbol description
nmur1b Predicted to enable neuropeptide receptor activity. Predicted to be involved in neuropeptide signaling pathway. Predicted to act upstream of or within signal transduction. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human NMUR1 (neuromedin U receptor 1).

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0001607 neuromedin U receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-131121-154 Predicted to enable neuropeptide receptor activity. Predicted to be involved in neuropeptide signaling pathway. Predicted to act upstream of or within signal transduction. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human NMUR1 (neuromedin U receptor 1).

Ensembl:

ensembl_id ENSDARG00000003944

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032003 True 1211 mRNA 0.47 2 13376099 13382726

Neighbor

gene id symbol gene type direction distance location
XLOC_016222 vps4b coding downstream 42108 13255986 ~ 13333991 (-)
XLOC_016221 kdsr coding downstream 121278 13223755 ~ 13254821 (-)
XLOC_016220 NA coding downstream 159830 13184227 ~ 13216269 (-)
XLOC_016219 BX908750.2 coding downstream 554568 12819999 ~ 12821531 (-)
XLOC_016218 NA coding downstream 671715 12703957 ~ 12704384 (-)
XLOC_016224 NA coding upstream 167841 13550567 ~ 13573898 (-)
XLOC_016225 NA coding upstream 289386 13672112 ~ 13673864 (-)
XLOC_016226 CABZ01044235.1 coding upstream 305898 13688624 ~ 13691834 (-)
XLOC_016227 CU657977.1 coding upstream 400667 13783393 ~ 13786658 (-)
XLOC_016228 NA coding upstream 492969 13875695 ~ 13877521 (-)
XLOC_016216 CR376724.1 non-coding downstream 1151560 12224423 ~ 12224539 (-)
XLOC_016213 CT573433.1 non-coding downstream 1394794 11976261 ~ 11981305 (-)
XLOC_016230 NA non-coding upstream 619669 14002395 ~ 14004942 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000004_02074726_02085013 NMUR1B coding CI01000004 null 2074485 ~ 2085104 (-)