XLOC_016236


Basic Information

Item Value
gene id XLOC_016236
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 14394120 ~ 14426667 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032023
CTTCGCCATAGTGTGGTTAGTAATTACGCGACCCTCCCACACTTCCATTCTCCGTTCAACGGCTGTCCTCAGCATCCCCTCAGTGGTGATGGCGTGTGTGGATGCTGCTAATGCGGCGGAGCCTGGGGCCTAACCAAACCGGTTAACGTTACCGGGGAACTCAAGAAACGAGGACGTGCGGTGCTGGGCATTATGAGCCTTACCTTCAACGGCCGGCTCCCGGATCACTGCTGTATCTCATGTCAGGGTGTTTGTTCGCGTGAAACCAAGGAATGAAGTGCTGCAACCATGATGCAAGGACTGAAAAAGCGTACCCGAAAGGCCTTCGGGAtacgaaaaaaagaaaaggacagTGACTCCACtggatCACCAGACAAGGAAAAATCAaaaaaaacTAATGGGGCTCCTAATGGCTTCTATGGTGAGATTGACTGGGATCGATATAACTCTCCTGATGTGGATGATGAGGGGTACAGTGTTAAACCTGGAGAACAAGGGG

Function

GO:

id name namespace
GO:0048468 cell development biological_process
GO:1901293 nucleoside phosphate biosynthetic process biological_process
GO:0030182 neuron differentiation biological_process
GO:0006164 purine nucleotide biosynthetic process biological_process
GO:0006732 obsolete coenzyme metabolic process biological_process
GO:0006733 obsolete oxidoreduction coenzyme metabolic process biological_process
GO:0019359 nicotinamide nucleotide biosynthetic process biological_process
GO:0019363 pyridine nucleotide biosynthetic process biological_process
GO:0019637 organophosphate metabolic process biological_process
GO:0009152 purine ribonucleotide biosynthetic process biological_process
GO:0009165 nucleotide biosynthetic process biological_process
GO:0048666 neuron development biological_process
GO:0048699 generation of neurons biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032023 True 499 lncRNA 0.51 5 14394120 14426667

Neighbor

gene id symbol gene type direction distance location
XLOC_016235 sgip1b coding downstream 3493 14276639 ~ 14390627 (-)
XLOC_016234 tctex1d1 coding downstream 122037 14207559 ~ 14272083 (-)
XLOC_016233 CU927934.2 coding downstream 364959 14021956 ~ 14029161 (-)
XLOC_016232 CU927934.1 coding downstream 383462 14009630 ~ 14010658 (-)
XLOC_016231 CU927934.3 coding downstream 384592 14007938 ~ 14009528 (-)
XLOC_016237 NA coding upstream 12318 14438985 ~ 14440380 (-)
XLOC_016238 pde4bb coding upstream 17609 14444276 ~ 14587224 (-)
XLOC_016239 CT583708.1 coding upstream 63275 14489942 ~ 14491843 (-)
XLOC_016240 NA coding upstream 87499 14514166 ~ 14515594 (-)
XLOC_016241 CABZ01026681.1 coding upstream 228467 14655134 ~ 14656669 (-)
XLOC_016230 NA non-coding downstream 389178 14002395 ~ 14004942 (-)
XLOC_016228 NA non-coding downstream 516599 13875695 ~ 13877521 (-)
XLOC_016242 NA non-coding upstream 237982 14664649 ~ 14676427 (-)
XLOC_016243 NA non-coding upstream 310376 14737043 ~ 14831123 (-)

Expression


Co-expression Network