XLOC_016239 (CT583708.1)


Basic Information

Item Value
gene id XLOC_016239
gene name CT583708.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 14489942 ~ 14491843 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032026
CAAGTCCACAAGTTTCCTCTTGCTATTTTGGTTCGTGAAATGGGATGAATCCGATAAGAGTGATAGCTGACGCGAACGGCGAGAAACACTCCTGGATCAGTCGGAGATGCAGCTCGATGGCTGTGCACGACTTTGGGAGACAGAGATGATGACCCGGAGCTGAAGGCTTTCTCTCCACTGGCCTCTCGCTCAACTGTGCTTCACTTTGACTCACAGAGTAACCTCAACTAAGAATATATGCATCAGCCCTCACTGCGTGTCTGACGGTGGACTACTGGAGTTCATCACAAGCTCGACGAGAATGCAGAAGTGGCCACTACATTTGCTCTTCTTTCTAGATCCTTCTAGCGGGTTTCCAACGATGAGGCTGTCGGCATCTTTTTACACAGCATTCACAATTTAACACACATTAAAGACATAATGGTGTGGCACCCACATAAACGTTGGCCAACttactgaaaaataattttaggtttacttttaaatgggtcagatgatatattttcctttcagtatactcacactcacacagatacttatacatatataaagagtAAAAATGCTGGGTATTAACACTGCTTATGattttgtgctatataaataaaacttgaacttgagttgcatttagaatttgaacttgaattagggttgaagtttattttatcataaatgcagatcagatctgttgatcaaatctttgtaaataatttatactGTAACAACTATACTTGTATTTTTATGGATT

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0035239 tube morphogenesis biological_process
GO:0048514 blood vessel morphogenesis biological_process
GO:1990399 epithelium regeneration biological_process
GO:0035295 tube development biological_process
GO:0009611 response to wounding biological_process
GO:0009888 tissue development biological_process
GO:0048568 embryonic organ development biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0048856 anatomical structure development biological_process
GO:0042246 tissue regeneration biological_process
GO:0045595 regulation of cell differentiation biological_process
GO:0001570 vasculogenesis biological_process
GO:0106030 neuron projection fasciculation biological_process
GO:0031099 regeneration biological_process
GO:0070654 sensory epithelium regeneration biological_process
GO:0048646 anatomical structure formation involved in morphogenesis biological_process
GO:0007399 nervous system development biological_process
GO:0032502 developmental process biological_process
GO:0007413 axonal fasciculation biological_process
GO:0007417 central nervous system development biological_process
GO:0007420 brain development biological_process
GO:0001944 vasculature development biological_process
GO:0060322 head development biological_process
GO:0042060 wound healing biological_process
GO:0009790 embryo development biological_process

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000092066

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032026 True 745 lncRNA 0.39 3 14489942 14491843

Neighbor

gene id symbol gene type direction distance location
XLOC_016237 NA coding downstream 49562 14438985 ~ 14440380 (-)
XLOC_016236 NA coding downstream 63275 14394120 ~ 14426667 (-)
XLOC_016235 sgip1b coding downstream 99315 14276639 ~ 14390627 (-)
XLOC_016234 tctex1d1 coding downstream 217859 14207559 ~ 14272083 (-)
XLOC_016233 CU927934.2 coding downstream 460781 14021956 ~ 14029161 (-)
XLOC_016240 NA coding upstream 22323 14514166 ~ 14515594 (-)
XLOC_016241 CABZ01026681.1 coding upstream 163291 14655134 ~ 14656669 (-)
XLOC_016242 NA coding upstream 172806 14664649 ~ 14676427 (-)
XLOC_016243 NA coding upstream 245200 14737043 ~ 14831123 (-)
XLOC_016244 NA coding upstream 296940 14788783 ~ 14789247 (-)
XLOC_016232 CU927934.1 non-coding downstream 479284 14009630 ~ 14010658 (-)
XLOC_016231 CU927934.3 non-coding downstream 480414 14007938 ~ 14009528 (-)
XLOC_016246 NA non-coding upstream 441955 14933798 ~ 14949626 (-)

Expression


Co-expression Network