XLOC_016242


Basic Information

Item Value
gene id XLOC_016242
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 14664649 ~ 14676427 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033791
GGGGTTTCATACTTTGCCATTTTTCAAATCCTCTGCACAGCTCTCTGGACCCACCATCCCCCAGGTCAGACTTGGGTCCTGATTGGGAATTATCCTCGCCACAGCTCTCTGGACCCACCATCCCCCAGGTCAGACTTGGGTCCTGATTGGGAATTATCCTCTCCACAGCTCTCTGGACCCACCATCCCCCAGGTCAGACTTAGGTCCTGATTGGGAATTTtggatggattttttttatttatttttttttcctccctgAGTTGCAATATGTGCATCGTGGCTCATGGACTAGAATAAGAGGATCCTGCCAAGAGGGTTGTTCATGCTCACTGTCTAAACGAGCGCATAAGACAGATACCTAATCGCAAAGAAGCGCAAGTCCCTACATTCAATCTAACGTTATGTTAAATTTCATGCAATCTAGTTCTGCTGTTCACCGCTTAATGAGTGCACCGTTCCCGGAGGTACTGCAATACCAGGTCGATGCGTGGAGTGGGTGGAGCAAGCCCCTAACCCATCTCCCAGCTGCAAAAATCAATTTAATATATAGTGCCCGGGTAGGGCACGTATCAGATATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAGCGATACCCACAAACTGTCAGCAGTAGGAGCCGCAATCTACGCCACAAATAATACAATGTCGGCAAGCATAACAGGTACTAATTTTTAACCCTTAAACCTCCAgcacatttgctgacagacagacagacagacataacaTTTTAGGCTTAACTAAGAGCCGTTGGTGACCAAAAACAAACTCCAAGCTTGAATACGGCAAAGAGACGTGACTATGGGCCGCTGGTGCCCAATGAGGGTACTTGAAAAGCCCCTGTTTGAGAGACTTTTCCGACCAAGTCAGTGTAGTTGCCATCCCCCCTTCAGAAGTCCAGACCAGGATTTTGTCTGGGCCGGCCTCGGAGATCAACCTGTCTTCCTTTACCTGCTTGAGCCTTGGGAAAAGACTTCCAGGGCGTTTCTTCCATGCCCGTATGAGCCACCACAGTCAGCGGGAATCAGTGACTCTTTTTTGGGGCAGCTCCAGCTCTAAAGGAACCCCTGGAAAGGACTTGCATGGCATTTCTTCCATGCCCGCGTGAGCCACCACA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033791 True 1156 lncRNA 0.48 2 14664649 14676427

Neighbor

gene id symbol gene type direction distance location
XLOC_016241 CABZ01026681.1 coding downstream 7980 14655134 ~ 14656669 (-)
XLOC_016238 pde4bb coding downstream 77425 14444276 ~ 14587224 (-)
XLOC_016240 NA coding downstream 149055 14514166 ~ 14515594 (-)
XLOC_016239 CT583708.1 coding downstream 172806 14489942 ~ 14491843 (-)
XLOC_016237 NA coding downstream 224269 14438985 ~ 14440380 (-)
XLOC_016243 NA coding upstream 60616 14737043 ~ 14831123 (-)
XLOC_016244 NA coding upstream 112356 14788783 ~ 14789247 (-)
XLOC_016245 si:ch73-366i20.1 coding upstream 113867 14790294 ~ 14798305 (-)
XLOC_016246 NA coding upstream 257371 14933798 ~ 14949626 (-)
XLOC_016247 CR788249.2 coding upstream 262159 14938586 ~ 14940003 (-)
XLOC_016236 NA non-coding downstream 237982 14394120 ~ 14426667 (-)
XLOC_016233 CU927934.2 non-coding downstream 635488 14021956 ~ 14029161 (-)
XLOC_016248 NA non-coding upstream 286066 14962493 ~ 14964219 (-)

Expression


Co-expression Network