XLOC_016265 (CR377211.2)


Basic Information

Item Value
gene id XLOC_016265
gene name CR377211.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 16512861 ~ 16519380 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032064
GTCTATTGTGAGTTACACAATGCAGCATTTAGCTCGCTCGTAAACATCGCTTATGTCCTCAGGTCACTGTCTGAGCAGAAGTTTCATCATTAGCCCTGACTGTCAGATGCTCTTCATCTCAGGAGCTGTATTTTTAAATGCTTGATAACAGATATAAGCGAGAAGAGGCTGAATCCGAAGCCTGAGAAGAAGCAGAGAAACAGAGGATCGAACGAGAGAAACACTTCCAGAAAGAGGAGCTGGAACACTAGGAAAGAAAGAAGcgTCTGCAAGAAATCATGAAGAGGACTTGTAAGAGTGACGCAGGAGCACagTAATATAGAAAAATCCATCAGAAGCTCTTCATAGTG
>TCONS_00032065
gcgacatctaacgTATATAGCTATGGGCGCTAACTAGTATTCACGTCGTATCATGCTTAACTCTTTTTCTCCTTTTACGCACTTTGAAAGTCTATTGTGAGTTACACAATGCAGCATTTAGCTCGCTCGTAAACATCGCTTATGTCCTCAGGTCACTGTCTGAGCAGAAGTTTCATCATTAGCCCTGACTGTCAGATGCTCTTCATCTCAGGAGCTGTATTTTTAAATGCTTGATAACAGATATAAGCGAGAAGAGGCTGAATCCGAAGCCTGAGAAGAAGCAGAGAAACAGAGGATCGAACGAGAGAAACACTTCCAGAAAGAGGAGCTGGAACACTAGGAAAGAAAGAAGGTAAAACAAAAGTTCACCaatcaagctaaacacagcatcacgctctctcattcacacacacacacatacgtgtgCTGGCTCGCtcaggagcgatattgttagaccgcccgctcccgtttaaattacaccagttaccgaccgctcccatgctttattcggaaatttattcccacgccgCACGAAATCTGGTACAgtcgcgggaatgcagacctctaatctggcattacggtggctcagtggttagcactgtcgcctcaaagaaagaaggttgctggttcgagtcccggctgggtcagttggcatttctgtgtggagtttgcctgctctaagtgtgtgtgaatgagtatctatggatgtttcccagtactgctttgcagctggaagggcatccaatgtgtaaaacatatgctggataagttggcggttcattctgttgtggtgacctctgataaataaagggactaaactgaaggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094962

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032064 False 350 lncRNA 0.43 4 16512861 16519291
TCONS_00032065 True 827 lncRNA 0.46 2 16517034 16519380

Neighbor

gene id symbol gene type direction distance location
XLOC_016264 CR377211.4 coding downstream 439 16508824 ~ 16512422 (-)
XLOC_016263 NA coding downstream 6066 16502780 ~ 16506795 (-)
XLOC_016262 atr coding downstream 63357 16384285 ~ 16449504 (-)
XLOC_016261 si:dkey-231j24.3 coding downstream 132578 16365768 ~ 16380283 (-)
XLOC_016260 arhgef4 coding downstream 153819 16198735 ~ 16359042 (-)
XLOC_016266 atp1b3a coding upstream 28326 16547706 ~ 16565690 (-)
XLOC_016267 CU929319.1 coding upstream 96560 16615940 ~ 16616055 (-)
XLOC_016268 clcn2a coding upstream 365905 16885285 ~ 17044959 (-)
XLOC_016269 BX640595.1 coding upstream 424892 16944272 ~ 16944391 (-)
XLOC_016270 pif1 coding upstream 576781 17096161 ~ 17115256 (-)
XLOC_016258 NA non-coding downstream 862271 15637219 ~ 15650590 (-)
XLOC_016253 CR392002.1 non-coding downstream 1405145 15102103 ~ 15107716 (-)
XLOC_016250 CR788249.3 non-coding downstream 1518371 14994393 ~ 14994490 (-)
XLOC_016276 NA non-coding upstream 2581042 19100422 ~ 19109304 (-)
XLOC_016278 NA non-coding upstream 2632992 19152372 ~ 19181569 (-)
XLOC_016280 BX511079.1 non-coding upstream 2732890 19252270 ~ 19269297 (-)

Expression


Co-expression Network