| Item | Value |
|---|---|
| gene id | XLOC_016278 |
| gene name | NA |
| gene type | non-coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 19152372 ~ 19181569 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| id | name | namespace |
|---|---|---|
| GO:0072698 | protein localization to microtubule cytoskeleton | biological_process |
| GO:0090304 | nucleic acid metabolic process | biological_process |
| GO:0006974 | cellular response to DNA damage stimulus | biological_process |
| GO:0006139 | nucleobase-containing compound metabolic process | biological_process |
| GO:0051276 | chromosome organization | biological_process |
| GO:0034641 | cellular nitrogen compound metabolic process | biological_process |
| GO:0006259 | DNA metabolic process | biological_process |
| GO:0006260 | DNA replication | biological_process |
| GO:0006261 | DNA-dependent DNA replication | biological_process |
| GO:0044380 | protein localization to cytoskeleton | biological_process |
| GO:0070765 | gamma-secretase complex | cellular_component |
| GO:0044424 | obsolete intracellular part | cellular_component |
| GO:0032991 | protein-containing complex | cellular_component |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:1902494 | catalytic complex | cellular_component |
| GO:0043226 | organelle | cellular_component |
| GO:0043227 | membrane-bounded organelle | cellular_component |
| GO:0043229 | intracellular organelle | cellular_component |
| GO:0043231 | intracellular membrane-bounded organelle | cellular_component |
| GO:0018024 | histone-lysine N-methyltransferase activity | molecular_function |
| id | description |
|---|---|
| ko03050 | Proteasome |
| ko03230 | Viral genome structure |
| ko05164 | Influenza A |
| ko05169 | Epstein-Barr virus infection |
| ko03200 | Viral proteins |
| ensembl_id | ENSDARG00000102520 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00033798 | False | 1018 | lncRNA | 0.37 | 3 | 19152372 | 19181553 |
| TCONS_00033799 | False | 29198 | lncRNA | 0.34 | 1 | 19152372 | 19181569 |
| TCONS_00032099 | True | 1037 | lncRNA | 0.38 | 3 | 19152372 | 19181569 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_016277 | kncn | coding | downstream | 23987 | 19119847 ~ 19128385 (-) |
| XLOC_016276 | NA | coding | downstream | 43068 | 19100422 ~ 19109304 (-) |
| XLOC_016275 | pbx1a | coding | downstream | 321578 | 18698388 ~ 18830794 (-) |
| XLOC_016274 | ptprfb | coding | downstream | 1204983 | 17578320 ~ 17947389 (-) |
| XLOC_016273 | kdm4ab | coding | downstream | 1659886 | 17450228 ~ 17492486 (-) |
| XLOC_016279 | cdc20 | coding | upstream | 36017 | 19217586 ~ 19234469 (-) |
| XLOC_016280 | BX511079.1 | coding | upstream | 70701 | 19252270 ~ 19269297 (-) |
| XLOC_016281 | zfyve9a | coding | upstream | 99260 | 19280829 ~ 19354622 (-) |
| XLOC_016282 | BX511079.2 | coding | upstream | 181229 | 19362798 ~ 19363161 (-) |
| XLOC_016283 | NA | coding | upstream | 197542 | 19379111 ~ 19382322 (-) |
| XLOC_016269 | BX640595.1 | non-coding | downstream | 2207981 | 16944272 ~ 16944391 (-) |
| XLOC_016267 | CU929319.1 | non-coding | downstream | 2536317 | 16615940 ~ 16616055 (-) |
| XLOC_016265 | CR377211.2 | non-coding | downstream | 2632992 | 16512861 ~ 16519380 (-) |
| XLOC_016264 | CR377211.4 | non-coding | downstream | 2639950 | 16508824 ~ 16512422 (-) |
| XLOC_016284 | BX664750.1 | non-coding | upstream | 324742 | 19506311 ~ 19513296 (-) |
| XLOC_016286 | BX664750.5 | non-coding | upstream | 342017 | 19523586 ~ 19523683 (-) |