XLOC_016556 (tradv1)



Basic Information


Item Value
gene id XLOC_016556
gene name tradv1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 36187180 ~ 36187673 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00032582
ATGCTGTTGCCCTGTCTGTTCATGCTTTTCAATTACTTGGGTGAAACAACTGGGGATAAAATTAAACCAGATAACGACACCGCACAGTTAATGGAGAATTCAAATATAACACTCTCATGCACATATGAAGGCTCCATTGACAGCTTGTACTGGTTCCAACAAAAAATTGGATCAAGACTGGAGTTTCTCATTATGATTGATGAAGCTTCTGAATACGTGACAAATGCCATTCCACCTCATCCACGCCTGTCAGTCCAACTTCACAAAGCACAAAAACGTGTTAGTCTAGAGATGTCGTCTGCAGCCGTTACGGATTCTGCTCTTTACTTTTGTGCTTTGAGGCCCACAGTAACAGGAAACGCACATTCACTGTACAAA

Function


GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-170601-119 No description available

Ensembl:

ensembl_id ENSDARG00000102757

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00032582 True 378 TR_V_gene 0.42 2 36187180 36187673

Neighbor


gene id symbol gene type direction distance location
XLOC_016555 NA coding downstream 108542 36076196 ~ 36078638 (-)
XLOC_016554 nmnat2 coding downstream 146360 36026183 ~ 36040820 (-)
XLOC_016553 NA coding downstream 453428 35728589 ~ 35733752 (-)
XLOC_016552 NA coding downstream 565313 35615395 ~ 35621867 (-)
XLOC_016551 tnn coding downstream 620070 35509418 ~ 35567110 (-)
XLOC_016557 tradv2.0.1 coding upstream 1913 36189586 ~ 36189919 (-)
XLOC_016558 tradv3.0.1 coding upstream 3134 36190807 ~ 36191279 (-)
XLOC_016559 tradv4.0.1 coding upstream 5673 36193346 ~ 36193896 (-)
XLOC_016560 si:ch211-106g8.62 coding upstream 7912 36195585 ~ 36196119 (-)
XLOC_016561 tradv4.0.2 coding upstream 8747 36196420 ~ 36196737 (-)
XLOC_016546 NA non-coding downstream 2079195 34106830 ~ 34107985 (-)
XLOC_016543 NA non-coding downstream 2260401 33843402 ~ 33926779 (-)
XLOC_016619 NA non-coding upstream 191566 36379239 ~ 36425603 (-)
XLOC_016633 NA non-coding upstream 559505 36747178 ~ 36826293 (-)
XLOC_016635 NA non-coding upstream 699070 36886743 ~ 36905394 (-)
XLOC_016638 NA non-coding upstream 745026 36932699 ~ 36933692 (-)
XLOC_016643 NA non-coding upstream 948995 37136668 ~ 37140483 (-)

Expression



Co-expression Network