XLOC_001771 (mpzl1l)


Basic Information

Item Value
gene id XLOC_001771
gene name mpzl1l
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 213878 ~ 223885 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003570
GATCTGACGTCAGCGAGACTGTGCTGAGATCAGCGCTAGTGTCCGTCAGTCTGATGCTGTAAACAAACGCCGAGGCTCCGTGAATCGGGCGTTATTCATGAAATCTAAAGGATGGAAATAAGGCTTCCGATCTCCTCACACAGTTATGTTTCTTTGTGTGTCTCTGCGGTGTTCATTATCGCCGGGGTCTCAGATGTGTCTGCGATAGACGTGTTCACCACAGCAGAGGTGTTTGTTGAGAACGGGACCACAGCCACTCTCAGCTGCAGCTTTAGGTCTAAAGAAGTGGTCAGTCGATTGACCACGGTGACGTGGTCTTTCCTTGCGGAGGGAGAGTCGGGAGCGTCCACCACAATCTTATATCACTCTGATGGGAAGTCTTTTCCGGGGGCGCTGCCGCAGTTTAAGGCTCGTGTGGAATGGGCTGGAGACATGAACAAGAAGGACGCGTCGATTCGTGTCCTTCAGATGCAGTTTAAAGACAACGGGACGTACAGCTGCGACGTGAAGAATCCTCCGGACATCACTGGACAGTCGTCTCCTACTAAAGTCAGGGTGGTCATGAAAGaggcTCTTCCTCAGACCAGCGCTGCAGTAATCGTGGGCGGTGTGATCGGAGCTGTGATCGGCATCATCCTCATCTCTGTGGTCACGTATCTGATCATCAGGAGGCAGAAGCCCAGTCATGACTATGAAGGcTGCACCTCGATAGAGAGTGTGAGCACACAGAACACTCGGGTGGGGAAGAAGGCGGAGTCGAGCAACGACAACTCCCGCTGCTCCAGCCCCTCCGCACCCGTACAGggaCCGGTGATTTACGCTCAGCTCGATCACTCCGGCAGCAAGAACTCCAGCTCTTTCCACAAGATGGAGCCGGTGGTGTACGCAGACATCCGCAAGAACTGA
>TCONS_00003571
TAAACAAACGCCGAGGCTCCGTGAATCGGGCGTTATTCATGAAATCTAAAGGATGGAAATAAGGCTTCCGATCTCCTCACACAGTTATGTTTCTTTGTGTGTCTCTGCGGTGTTCATTATCGCCGATGTGTCTGCGATAGACGTGTTCACCACAGCAGAGGTGTTTGTTGAGAACGGGACCACAGCCACTCTCAGCTGCAGCTTTAGGTCTAAAGAAGTGGTCAGTCGATTGACCACGGTGACGTGGTCTTTCCTTGCGGAGGGAGAGTCGGGAGCGTCCACCACAATCTTATATCACTCTGATGGGAAGTCTTTTCCGGGGGCGCTGCCGCAGTTTAAGGCTCGTGTGGAATGGGCTGGAGACATGAACAAGAAGGACGCGTCGATTCGTGTCCTTCAGATGCAGTTTAAAGACAACGGGACGTACAGCTGCGACGTGAAGAATCCTCCGGACATCACTGGACAGTCGTCTCCTACTAAAGTCAGGGTGGTCATGAAAGaggcTCTTCCTCAGACCAGCGCTGCAGTAATCGTGGGCGGTGTGATCGGAGCTGTGATCGGCATCATCCTCATCTCTGTGGTCACGTATCTGATCATCAGGAGGCAGAAGCCCAGTCATGACTATGAAGGggaCCGGTGATTTACGCTCAGCTCGATCACTCCGGCAGCAAGAACTCCAGCTCTTTCCACAAGATGGAGCCGGTGGTGTACGCAGACATCCGCAAGAACTGAACCCGCATGCACATCTCTG

Function

symbol description
mpzl1l Acts upstream of or within convergent extension involved in axis elongation. Predicted to be located in membrane. Predicted to be integral component of plasma membrane. Predicted to be active in plasma membrane. Is expressed in blastomere and head. Orthologous to human MPZL1 (myelin protein zero like 1).

GO:

id name namespace
GO:0060028 convergent extension involved in axis elongation biological_process
GO:0007165 signal transduction biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005515 protein binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050417-455 Acts upstream of or within convergent extension involved in axis elongation. Predicted to be located in membrane. Predicted to be integral component of plasma membrane. Predicted to be active in plasma membrane. Is expressed in blastomere and head. Orthologous to human MPZL1 (myelin protein zero like 1).

Ensembl:

ensembl_id ENSDARG00000059048

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003570 False 906 mRNA 0.54 6 213878 223866
TCONS_00003571 True 751 mRNA 0.52 5 213937 223885

Neighbor

gene id symbol gene type direction distance location
XLOC_001770 CU469093.1 coding upstream 1931 211782 ~ 211947 (+)
XLOC_001769 ets2 coding upstream 17063 187760 ~ 196815 (+)
XLOC_001768 KCNJ15 coding upstream 54281 158590 ~ 159597 (+)
XLOC_001767 NA coding upstream 79909 121898 ~ 133969 (+)
XLOC_001766 pigp coding upstream 97842 110868 ~ 116036 (+)
XLOC_001772 lrrc32 coding downstream 28540 252425 ~ 257043 (+)
XLOC_001773 NA coding downstream 58439 282324 ~ 283931 (+)
XLOC_001774 zgc:171929 coding downstream 110742 334627 ~ 349756 (+)
XLOC_001775 si:ch1073-303d10.1 coding downstream 151157 375042 ~ 382616 (+)
XLOC_001776 NA coding downstream 174459 398344 ~ 398759 (+)
XLOC_001764 NA non-coding upstream 154130 58893 ~ 59748 (+)
XLOC_001763 NA non-coding upstream 183040 30360 ~ 30838 (+)
XLOC_001779 NA non-coding downstream 195348 419233 ~ 420892 (+)
XLOC_001786 NA non-coding downstream 316408 540293 ~ 543589 (+)
XLOC_001789 NA non-coding downstream 509902 733787 ~ 796894 (+)

Expression


Co-expression Network