XLOC_001778 (dact3a)


Basic Information

Item Value
gene id XLOC_001778
gene name dact3a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 406146 ~ 417188 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003576
tcCTCTCCAGCATGGACCCATCCTCGGACGCTGCTGCGGCCAGCTTCTGAGCTCCTCCGTCGGGCAGAGCTCCGGGATGTTCCGCGTGTTCTCCTCGGAGCGCGGGCGGCAGAAGCAGCGGCTGGAGCTCAGTCTGGCCGGAATCTGCGAGCTGGAGCTGCTCAAGCGGCGGCATCAGGCGCTTATCATCTCCGCGCTGGGACTCCACAGTCCAGACCCGCCGCCGGAGCACCAGTGGCGGCCCGCGGAGCAGCAGAGCCCGCGCGGGACACCGgagagCTGCTGGAGTCTGATGAAGCTGCTGCAGCATCAGGTTGGAGAGCTGAAGGTGGACACAGAGAACAGCAGCGCGGCAGCAGTGGAGAACTGCACTGAAGATGGAGAGAGAGCCGGCGCAGGTTTCTCTGAGGGCCCGTTGGACTCCTCTAGTCACGGTGAAATCTCCTCAAGGGCTGTTTGCCCCGTCCGGCTCACTGAGAGACCCAAATCTGCTGGGGATGTGTGCATCGGGGGGATTCGCGCCGCAGTTCCCCGCTCTCTCTCTGCACCATATCCACCACTAGAGGGCATCGCAGAGGGCATCTCTGAGGATGAGCCGTGGATCTGGCAACCCATCGAGGACATCGATGAAAAACCCACGGTGGATGACTACAGACAGGCACAGCACGTGGAGACCTACATCCTCGGACTGATCCAGCGGCGCTCGCCTCCTGCCAGACCCAATAAACCTCGCACCAGCCTCAGTCCAGAACCCAGAGCAGTGATCCGACAGAGCAGCTTAAGCCGAAAAGAGCCACCGTTTGTCCAGGAGAGACTTGCGTGGGCTGAAGACGAGTGCACAGGAGTCCGCTATCCCAGAATGCACACATCCACATCTCTGGATTTCCCCTGCGGAGCTTTGGATCCCAGTAGCAGTGAAGCCGAGTCTCCGCAACACTTCtaccaacacacacactctccttcCTCTGATGAGCTGGTGAACGCACAGTACATCCCCGCGCAGCCCTGTCGAGCCCAAGCAAGACCCACGACCTATAAATCCCCCAAATCCTCATATTCGCCAGAGAGGAAGCCAAGAGCCACACCTAAGAAGTGTCGGTTTACAGAGGACAAGAATGCACAGAAGAAACCCGGACGAAAAGCCTGTCGTGCACAGTCTGAGAACAGCCTGCTGGGTCAGCGCGGAGTCTCAGAGCGCAGGTATAATACAGTGGAGCGAGACGCAGTGCGGAGCGTCCCGAAAGCCAGACGTAGTTCGGGCAGACGTTGGCGATCCACGCAGGAGCTCAGTCAGGATGAAGCAGAGATACCCAGTGAACAGCCAATCAGACGCTCCCGAAGAGCTCGACCCGTCTGCGGATACACCCATCCCACACCGCATCACCCCCAGCCTCAGCTCCGCGACTACACTGCGGTCCCGGGAGAGTCTGAGTCTAGCCTGAGCGAGGCCGAGTCCCCCGGCTCCAGCTCTCTGTCCAGCGACTCTGATGGCAGTGGGGGATTGGTGTGGCCTCAGCAGCTCCATCCGCAGCCGGCTCCTACATCTCCGTCACACCCACCCGGACATGGACAAGACTTGCAGCCCAAAGCCTTCGTGAAGATCAAGGCCTCGCATGCGCTCAAGAAAAAGATCCTGAGGTTCAGAAGCGGATCCCTCAAAGTTATGACCACCGTGTGA
>TCONS_00003577
atgcgtgtgtgtctaactgtgtgtgtgtgttttgtctcaGGTTTCTCTGAGGGCCCGTTGGACTCCTCTAGTCACGGTGAAATCTCCTCAAGGGCTGTTTGCCCCGTCCGGCTCACTGAGAGACCCAAATCTGCTGGGGATGTGTGCATCGGGGGGATTCGCGCCGCAGTTCCCCGCTCTCTCTCTGCACCATATCCACCACTAGAGGGCATCGCAGAGGGCATCTCTGAGGATGAGCCGTGGATCTGGCAACCCATCGAGGACATCGATGAAAAACCCACGGTGGATGACTACAGACAGGCACAGCACGTGGAGACCTACATCCTCGGACTGATCCAGCGGCGCTCGCCTCCTGCCAGACCCAATAAACCTCGCACCAGCCTCAGTCCAGAACCCAGAGCAGTGATCCGACAGAGCAGCTTAAGCCGAAAAGAGCCACCGTTTGTCCAGGAGAGACTTGCGTGGGCTGAAGACGAGTGCACAGGAGTCCGCTATCCCAGAATGCACACATCCACATCTCTGGATTTCCCCTGCGGAGCTTTGGATCCCAGTAGCAGTGAAGCCGAGTCTCCGCAACACTTCtaccaacacacacactctccttcCTCTGATGAGCTGGTGAACGCACAGTACATCCCCGCGCAGCCCTGTCGAGCCCAAGCAAGACCCACGACCTATAAATCCCCCAAATCCTCATATTCGCCAGAGAGGAAGCCAAGAGCCACACCTAAGAAGTGTCGGTTTACAGAGGACAAGAATGCACAGAAGAAACCCGGACGAAAAGCCTGTCGTGCACAGTCTGAGAACAGCCTGCTGGGTCAGCGCGGAGTCTCAGAGCGCAGGTATAATACAGTGGAGCGAGACGCAGTGCGGAGCGTCCCGAAAGCCAGACGTAGTTCGGGCAGACGTTGGCGATCCACGCAGGAGCTCAGTCAGGATGAAGCAGAGATACCCAGTGAACAGCCAATCAGACGCTCCCGAAGAGCTCGACCCGTCTGCGGATACACCCATCCCACACCGCATCACCCCCAGCCTCAGCTCCGCGACTACACTGCGGTCCCGGGAGAGTCTGAGTCTAGCCTGAGCGAGGCCGAGTCCCCCGGCTCCAGCTCTCTGTCCAGCGACTCTGATGGCAGTGGGGGATTGGTGTGGCCTCAGCAGCTCCATCCGCAGCCGGCTCCTACATCTCCGTCACACCCACCCGGACATGGACAAGACTTGCAGCCCAAAGCCTTCGTGAAGATCAAGGCCTCGCATGCGCTCAAGAAAAAGATCCTGAGGTTCAGAAGCGGATCCCTCAAAGTTATGACCACCGTGTGA

Function

symbol description
dact3a Predicted to be involved in negative regulation of canonical Wnt signaling pathway. Predicted to be active in cytoplasm. Is expressed in several structures, including cranial neural crest cell; immature eye; mesoderm; nervous system; and pectoral fin bud. Orthologous to human DACT3 (dishevelled binding antagonist of beta catenin 3).

GO:

id name namespace
GO:0090090 negative regulation of canonical Wnt signaling pathway biological_process
GO:0005737 cytoplasm cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-091204-226 Predicted to be involved in negative regulation of canonical Wnt signaling pathway. Predicted to be active in cytoplasm. Is expressed in several structures, including cranial neural crest cell; immature eye; mesoderm; nervous system; and pectoral fin bud. Orthologous to human DACT3 (dishevelled binding antagonist of beta catenin 3).

Ensembl:

ensembl_id ENSDARG00000087910

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003576 False 1678 mRNA 0.60 4 406146 417188
TCONS_00003577 True 1320 mRNA 0.58 2 413502 417188

Neighbor

gene id symbol gene type direction distance location
XLOC_001777 FAM222A coding upstream 5933 399363 ~ 400213 (+)
XLOC_001776 NA coding upstream 7387 398344 ~ 398759 (+)
XLOC_001775 si:ch1073-303d10.1 coding upstream 23530 375042 ~ 382616 (+)
XLOC_001774 zgc:171929 coding upstream 56390 334627 ~ 349756 (+)
XLOC_001773 NA coding upstream 122215 282324 ~ 283931 (+)
XLOC_001779 NA coding downstream 2045 419233 ~ 420892 (+)
XLOC_001780 zdhhc8a coding downstream 11081 428269 ~ 432188 (+)
XLOC_001781 zdhhc8a coding downstream 22504 439692 ~ 449159 (+)
XLOC_001782 zdhhc8a coding downstream 36431 453619 ~ 454622 (+)
XLOC_001783 arvcfa coding downstream 49738 466926 ~ 505370 (+)
XLOC_001770 CU469093.1 non-coding upstream 194199 211782 ~ 211947 (+)
XLOC_001767 NA non-coding upstream 272177 121898 ~ 133969 (+)
XLOC_001764 NA non-coding upstream 346398 58893 ~ 59748 (+)
XLOC_001786 NA non-coding downstream 123105 540293 ~ 543589 (+)
XLOC_001789 NA non-coding downstream 316599 733787 ~ 796894 (+)
XLOC_001790 CU694495.1 non-coding downstream 388056 805244 ~ 805359 (+)
XLOC_001791 NA non-coding downstream 442167 859355 ~ 937042 (+)

Expression


Co-expression Network