XLOC_001780 (zdhhc8a)


Basic Information

Item Value
gene id XLOC_001780
gene name zdhhc8a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 428269 ~ 432188 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003578
CAAACCCTCGCTTCCTGATCGGCTCCGGAGACAACCCTACTGTCCTGCAGgagggCTGCAGATATAATGTCCTGCACGTGGCAGCGAAGGAGAATCAGGCAGGAATGGCTCGTCTTCTGCTGGAGACGCTGGAGGACCCGGAGTTCATGAAGCTGATGTACCCGCAGGACCAGGAGAACATGCTGAGCCAGCGCATACGCTATATAGTGGACCTGTACCTGAACACACCAGACAGAGCTAGTAACGAGACGCCGCTGCACTTCGCCTGTAAGTTCGGCTGTCCAGAGGTGGTGAATGTTCTGTGTTCTCATCCGTTCATCGATAAACACTGCAGGAACAAATACGACCAGCAGCCGTCCAGTGTGATCTGTGAGCGAAAGAACAGAAGTAAAGACGTGAAGCAGAAGATCCTGCAGTATCTGGAAGACAGGTTTTATGTGCCATTACTGCGTGCTGAAGACAACACTCTGCCTCCGGTGATCGGCGCCCCCTGGTGTCCTGGTGCTCAGGAGTCATGTGACCAATCGCTTGAGCAGGACAGAGTCATGGACAGTCCCAAAAACCCCATAATGACCATCAGGGCTTTCGTTGGGCCTCTGAGTTCCGCAAAGGCAGAGGAGTTTCAGAGACGGTGGAAAACACCGCCGCGG

Function

symbol description
zdhhc8a Predicted to enable protein phosphatase 2A binding activity. Predicted to be involved in negative regulation of phosphorylation and positive regulation of protein dephosphorylation. Predicted to act upstream of or within cell division; mitotic nuclear membrane reassembly; and protein palmitoylation. Predicted to be located in Golgi membrane and mitochondrion. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Orthologous to human ZDHHC8 (zinc finger DHHC-type palmitoyltransferase 8).

GO:

id name namespace
GO:0035307 positive regulation of protein dephosphorylation biological_process
GO:0007084 mitotic nuclear envelope reassembly biological_process
GO:0042326 negative regulation of phosphorylation biological_process
GO:0018345 protein palmitoylation biological_process
GO:0005783 endoplasmic reticulum cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016409 palmitoyltransferase activity molecular_function
GO:0051721 protein phosphatase 2A binding molecular_function
GO:0016740 transferase activity molecular_function
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0019706 protein-cysteine S-palmitoyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-091118-26 Predicted to enable protein phosphatase 2A binding activity. Predicted to be involved in negative regulation of phosphorylation and positive regulation of protein dephosphorylation. Predicted to act upstream of or within cell division; mitotic nuclear membrane reassembly; and protein palmitoylation. Predicted to be located in Golgi membrane and mitochondrion. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Orthologous to human ZDHHC8 (zinc finger DHHC-type palmitoyltransferase 8).

Ensembl:

ensembl_id ENSDARG00000042872

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003578 True 650 mRNA 0.54 6 428269 432188

Neighbor

gene id symbol gene type direction distance location
XLOC_001779 NA coding upstream 7377 419233 ~ 420892 (+)
XLOC_001778 dact3a coding upstream 11081 406146 ~ 417188 (+)
XLOC_001777 FAM222A coding upstream 28056 399363 ~ 400213 (+)
XLOC_001776 NA coding upstream 29510 398344 ~ 398759 (+)
XLOC_001775 si:ch1073-303d10.1 coding upstream 45653 375042 ~ 382616 (+)
XLOC_001781 zdhhc8a coding downstream 7504 439692 ~ 449159 (+)
XLOC_001782 zdhhc8a coding downstream 21431 453619 ~ 454622 (+)
XLOC_001783 arvcfa coding downstream 34738 466926 ~ 505370 (+)
XLOC_001784 si:ch211-242f23.3 coding downstream 74350 506538 ~ 512306 (+)
XLOC_001785 npffr1l3 coding downstream 86358 518546 ~ 532628 (+)
XLOC_001773 NA non-coding upstream 144338 282324 ~ 283931 (+)
XLOC_001770 CU469093.1 non-coding upstream 216322 211782 ~ 211947 (+)
XLOC_001767 NA non-coding upstream 294300 121898 ~ 133969 (+)
XLOC_001786 NA non-coding downstream 108105 540293 ~ 543589 (+)
XLOC_001789 NA non-coding downstream 301599 733787 ~ 796894 (+)
XLOC_001790 CU694495.1 non-coding downstream 373056 805244 ~ 805359 (+)
XLOC_001791 NA non-coding downstream 427167 859355 ~ 937042 (+)
XLOC_001794 NA non-coding downstream 1106111 1538299 ~ 1540732 (+)

Expression


Co-expression Network