XLOC_001781 (zdhhc8a)


Basic Information

Item Value
gene id XLOC_001781
gene name zdhhc8a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 439692 ~ 449159 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003579
CGCTTATATCCCCGTGTCCACCGCTGCCGCTATTCTGGTCTCTTCATCCACACTTTTCTTCGTCTTCACGTGTCCGTGGCTGGCTGTGAGTGTGTCTCCTGCTTTTCCACCATGTGTCGGGGTCCTGTTCCTCTTTGTGATGGCAAACTTTACCATGGCCACGTTCATGGACGCCGGCGTGTTCCCGAGGGCTAATGAAGACGAGGATAAGGATGATGACTTCCGCGCGCCGCTCTACAAGACTGCGGAGGTGCGCGGCGTACAGGTGCGCATGAAGTGGTGCGGCTCATGTCACTTCTACAGACCACCCAGGTGTTCACACTGCAGCGTGTGTGACCACTGTGTGGAgGACTTTGATCATCACTGCCCGTGGGTGAATAACTGCATCGGCAGACGGAACTACcgcttcttcttcctcttcctgcTGACTCTGAGTCTCCACATGGTGGGTGTGTTTTCTGGAGCTCTGCTGTTTGTTCTGGATCACCTGGAGAACCTGTGGGAGCCGCACGCCGCCGTCTCaCTGGCAGTCATGAGTGTCTCTGGCCTGTTCTTCATCCCTGTGCTGGGCCTGTCCTGTTTTCATCTGGTGCTGGTGGCCAGAGGACGCACCACCAATGAGCAGGTCACCGGGAAGTTCCAGGGTGGAGTGAATCCATTCACCCGCGGCTGCTGTCAGAACCTCCAGTTCCTGCTCTTCAGCCCTGTCACACCGAG

Function

symbol description
zdhhc8a Predicted to enable protein phosphatase 2A binding activity. Predicted to be involved in negative regulation of phosphorylation and positive regulation of protein dephosphorylation. Predicted to act upstream of or within cell division; mitotic nuclear membrane reassembly; and protein palmitoylation. Predicted to be located in Golgi membrane and mitochondrion. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Orthologous to human ZDHHC8 (zinc finger DHHC-type palmitoyltransferase 8).

GO:

id name namespace
GO:0035307 positive regulation of protein dephosphorylation biological_process
GO:0007084 mitotic nuclear envelope reassembly biological_process
GO:0042326 negative regulation of phosphorylation biological_process
GO:0018345 protein palmitoylation biological_process
GO:0005783 endoplasmic reticulum cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016409 palmitoyltransferase activity molecular_function
GO:0051721 protein phosphatase 2A binding molecular_function
GO:0016740 transferase activity molecular_function
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0019706 protein-cysteine S-palmitoyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-091118-26 Predicted to enable protein phosphatase 2A binding activity. Predicted to be involved in negative regulation of phosphorylation and positive regulation of protein dephosphorylation. Predicted to act upstream of or within cell division; mitotic nuclear membrane reassembly; and protein palmitoylation. Predicted to be located in Golgi membrane and mitochondrion. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Orthologous to human ZDHHC8 (zinc finger DHHC-type palmitoyltransferase 8).

Ensembl:

ensembl_id ENSDARG00000042872

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003579 True 717 mRNA 0.57 6 439692 449159

Neighbor

gene id symbol gene type direction distance location
XLOC_001780 zdhhc8a coding upstream 7504 428269 ~ 432188 (+)
XLOC_001779 NA coding upstream 18800 419233 ~ 420892 (+)
XLOC_001778 dact3a coding upstream 22504 406146 ~ 417188 (+)
XLOC_001777 FAM222A coding upstream 39479 399363 ~ 400213 (+)
XLOC_001776 NA coding upstream 40933 398344 ~ 398759 (+)
XLOC_001782 zdhhc8a coding downstream 4460 453619 ~ 454622 (+)
XLOC_001783 arvcfa coding downstream 17767 466926 ~ 505370 (+)
XLOC_001784 si:ch211-242f23.3 coding downstream 57379 506538 ~ 512306 (+)
XLOC_001785 npffr1l3 coding downstream 69387 518546 ~ 532628 (+)
XLOC_001786 NA coding downstream 91134 540293 ~ 543589 (+)
XLOC_001773 NA non-coding upstream 155761 282324 ~ 283931 (+)
XLOC_001770 CU469093.1 non-coding upstream 227745 211782 ~ 211947 (+)
XLOC_001767 NA non-coding upstream 305723 121898 ~ 133969 (+)
XLOC_001789 NA non-coding downstream 284628 733787 ~ 796894 (+)
XLOC_001790 CU694495.1 non-coding downstream 356085 805244 ~ 805359 (+)
XLOC_001791 NA non-coding downstream 410196 859355 ~ 937042 (+)
XLOC_001794 NA non-coding downstream 1089140 1538299 ~ 1540732 (+)

Expression


Co-expression Network