XLOC_017947


Basic Information

Item Value
gene id XLOC_017947
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 12853911 ~ 12854805 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036454
GAGACACCTGAAGAAATTTGCAACTGTTCAATTGATTCCATTGTGGTGTCAGAGGGTAAAAAGGCAATTCTCATAGGAATTGATGGTCGTTACAATGTCAGCTTGCCAGaattcaaatgcttaaaatgtAACGTAAGCAGAACAACCAACATTCCACTGTTGGTCCGCTCTGGATACTGGCCTGCCACAGCAAGCTGCGAAACTATTTACAAAATAGATGTCTTTGTGTCTTATGATCACATGAAGCTGACTGCTCCTGGAATGTCCAGACAGTCTTTTACCGGTTTACTGGAACAGCGGACAGAGTTCTTTGGCCGAGTATCAATtaaaacattttcagaataatTTCTTTCTCAATTTTGGCAGTGCAATATTTTCTtattgggtttatggtttttgttgttttttaggatGGAAAGATCTGTGCTGATGCATTTCAAAGAAGCTTTTTTGAGTGGAGATACTGTCAGTTTGAAATTGATCAGCTCTGTGGGCTAAAAGTGTTCGACTGTCCAGCCTGTTCTCCATTTATGCTAGCTGTGTCAGTAGATGGCAACAGGAAAATGTATCGCTTCAAAAGAGGGTAGGTGAATTTCTGTATCTGTGTGAAAAGCATttctaaaaaatattcaataccaaAGCTTTTAATTAAATTGTTGTGTATCTATTTTATAGAGCTGAAGACCATGGCCTGTTTAAGGGTGTCTTTGTCTGTGAGGATGATGATGTTTCCAAGTTCGTGgactacattaataataaaacaaagcatgTAAGTTCCATTATTCCTTTAACAATTGTAATTTTTCATCgccaaataaag
>TCONS_00036453
GAGACACCTGAAGAAATTTGCAACTGTTCAATTGATTCCATTGTGGTGTCAGAGGGTAAAAAGGCAATTCTCATAGGAATTGATGGTCGTTACAATGTCAGCTTGCCAGaattcaaatgcttaaaatgtAACGTAAGCAGAACAACCAACATTCCACTGTTGGTCCGCTCTGGATACTGGCCTGCCACAGCAAGCTGCGAAACTATTTACAAAATAGATGTCTTTGTGTCTTATGATCACATGAAGCTGACTGCTCCTGGAATGTCCAGACAGTCTTTTACCGGTTTACTGGAACAGCGGACAGAGTTCTTTGGCCGAGTATCAATtaaaacattttcagaataatTTCTTTCTCAATTTTGGCAGTGCAATATTTTCTtattgggtttatggtttttgttgttttttaggatGGAAAGATCTGTGCTGATGCATTTCAAAGAAGCTTTTTTGAGTGGAGATACTGTCAGTTTGAAATTGATCAGCTCTGTGGGCTAAAAGTGTTCGACTGTCCAGCCTGTTCTCCATTTATGCTAGCTGTGTCAGTAGATGGCAACAGGAAAATGTATCGCTTCAAAAGAGGAGCTGAAGACCATGGCCTGTTTAAGGGTGTCTTTGTCTGTGAGGATGATGATGTTTCCAAGTTCGTGgactacattaataataaaacaaagcatgTAAGTTCCATTATTCCTTTAACAATTGTAATTTTTCATCgccaaataaag

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036454 False 820 lncRNA 0.37 2 12853911 12854805
TCONS_00036453 True 728 lncRNA 0.39 3 12853911 12854805

Neighbor

gene id symbol gene type direction distance location
XLOC_017946 NA coding downstream 550 12852898 ~ 12853361 (-)
XLOC_017945 NA coding downstream 1596 12850585 ~ 12852315 (-)
XLOC_017944 NA coding downstream 194816 12657817 ~ 12659095 (-)
XLOC_017942 si:dkey-97l20.6 coding downstream 211226 12566101 ~ 12642685 (-)
XLOC_017943 BX005367.1 coding downstream 246490 12605718 ~ 12607421 (-)
XLOC_017948 NA coding upstream 162 12854967 ~ 12857046 (-)
XLOC_017949 NA coding upstream 72377 12927182 ~ 12927955 (-)
XLOC_017950 si:dkey-54g2.2 coding upstream 81291 12936096 ~ 12936861 (-)
XLOC_017951 ints7 coding upstream 165684 13020489 ~ 13142357 (-)
XLOC_017952 BX510324.2 coding upstream 349261 13204066 ~ 13208752 (-)
XLOC_017928 CU539064.1 misc downstream 2800210 10053405 ~ 10053701 (-)
XLOC_017941 BX322618.2 non-coding downstream 610165 12239930 ~ 12243746 (-)
XLOC_017953 NA non-coding upstream 454477 13309282 ~ 13313010 (-)
XLOC_017955 BX470123.1 non-coding upstream 514422 13369227 ~ 13369343 (-)

Expression


Co-expression Network