XLOC_001798 (triap1)


Basic Information

Item Value
gene id XLOC_001798
gene name triap1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 1681518 ~ 1684882 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003599
ATCGTCCTGCGCCACGCGCGAGAGAGAGAGCCCGGTGGTAAAACGGCAAAGTCAAGCGAGATAGGCAGTGAAATATCAACCGACAGCTTAATACGCTAAACTGTGTGTGAGAGGTGCGTGAAGATGAACAGTGTCGGCGAGGGCTGCACGGAGCTCAAGCGCGAATATGACCAGTGCTTTAACCGCTGGTTTGCAGAGAAATTCCTGAAGGGAGACCGAAGCGCGGATCCCTGCAGCGAGCTATTCAACAAATACCACACGTGTGTTCAGAAAGCCATCAAGGAGAAGGACATCCCTATAGAGGGTGTGGAGTTCATGGGCCCGAACAGCGAGAAAGCAGACAGCTGATGCTCATCTCACTGTGACTGATGTTGGTTTATCTTTGTTTTAATGTGATAAAGACAGATGTGGCGCCATCATCAGGACGCAAAGACTGCAGCGCTGGCCTTCTGATGGACATCTGGATTAAGTGCACATTGATGAGACTGAAAACTCTACATTTGGTTATTTGCCTGTTCAATCATTATAAAAGAGGGATCGTTTGGCATGTGGGGAAATGCATTCAGATCATTCGATCAGCTGTGTGTTTGGGTTTCATGTGcctctgaattattattatttttaatgtagagTAAGGCACGGTGTACAGATGAAGTGTGGGTGCTTTATTTTCATTGCAGACTAATCATTGATGAGAgcaattgttttatttctgcttccATAACCGTGATTTGGACACTACCATTTTGGGAAGAGGGAGTGTAATggtgtttatatttaaataaataattcaagagATAATTAACAGATTTAAGTTATGAGTAGGAGAATCAAAGCTTTCTGGAACTTAAAATAAAGCGTGCCGAATGATAGTTCTGAAATGTCTGGTGAACTCAAACATGCATAAAATGCCTTTTGCAAATCAACTGCAGATGATTTTTGAAGGTGTTATCTATGAAATGcatttaatgattaaatatgaaTTGTCTA

Function

symbol description
triap1 Is expressed in adaxial cell; myotome; optic vesicle; and retina. Orthologous to human TRIAP1 (TP53 regulated inhibitor of apoptosis 1).

GO: NA

KEGG:

id description
ko03029 Mitochondrial biogenesis

ZFIN:

id description
ZDB-GENE-050417-161 Is expressed in adaxial cell; myotome; optic vesicle; and retina. Orthologous to human TRIAP1 (TP53 regulated inhibitor of apoptosis 1).

Ensembl:

ensembl_id ENSDARG00000014963

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003599 True 990 mRNA 0.42 2 1681518 1684882

Neighbor

gene id symbol gene type direction distance location
XLOC_001796 sgsm1b coding upstream 6156 1638876 ~ 1675362 (+)
XLOC_001797 CU929183.1 coding upstream 16480 1664922 ~ 1665038 (+)
XLOC_001795 ora5 coding upstream 90415 1590604 ~ 1591103 (+)
XLOC_001794 NA coding upstream 140786 1538299 ~ 1540732 (+)
XLOC_001793 gdnfa coding upstream 267357 1396940 ~ 1414161 (+)
XLOC_001799 NA coding downstream 13183 1698065 ~ 1713235 (+)
XLOC_001800 NA coding downstream 19023 1703905 ~ 1712770 (+)
XLOC_001801 apc coding downstream 164992 1849874 ~ 1893095 (+)
XLOC_001802 C3AR1 coding downstream 214713 1899595 ~ 1900662 (+)
XLOC_001803 NA coding downstream 219473 1904355 ~ 1921020 (+)
XLOC_001791 NA non-coding upstream 744476 859355 ~ 937042 (+)
XLOC_001790 CU694495.1 non-coding upstream 876159 805244 ~ 805359 (+)
XLOC_001789 NA non-coding upstream 884624 733787 ~ 796894 (+)
XLOC_001804 NA non-coding downstream 281975 1966857 ~ 1991468 (+)
XLOC_001806 NA non-coding downstream 717426 2402308 ~ 2437908 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01048185_00000128_00000286 TRIAP1 coding CI01048185 null 128 ~ 286 (+)