XLOC_001807



Basic Information


Item Value
gene id XLOC_001807
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 2499533 ~ 2504042 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00005809
CTCTGAAGTGTTTTTATTCAGTTGCGCCTATTTAACAGATTCCCACAAAACATGACGATAAATACATAATTAAGGGTCCCTGTacatttcatcttcatcatcagtgTACTCAGTATTTACAGTCAGATTGAAATACTACAAACATACATGTTATTTACTCTTCAGGCACCTTGTGTGTCCCGttgaaaaacacacagacacttgACGTTGAAAAAAGGAAAAGTCGAACACGTGATTAGCTCCTGACGTCACCTGTAGCAGCACGCTGTTCCAAAAATATCTGGCATTATGAAAAAAGATTAGTCTGTAATACTATTCAGTACATGTACAATACTTTACAATCCTAAAATGATGAATATGACTGCTGTTATGTTACATAGTAAAACGTCACAAGCTGTGAACATCGTATGTCCAAAAAACAAAAGCGCGGGAACTACAGCCCAGCCATCATTAAACGCCGTCCGCGGTCATACAAACATCACCGCGACTTTTAAGCTCTACAAAGAAAGATTCACGTCATTTCACTGCATGATAAATATGACTGGAATGATGCAAAACATATGGGAGAAGATTAAGGGTGGAAAAGAAAATTGACATTCTGTTCATGATGAGGAAGGAATGATGTGTATGTGGAACAGGAAATGAGCGCAGTGATGATTTAGGTTGAGGGTTTC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00005809 True 674 lncRNA 0.38 2 2499533 2504042

Neighbor


gene id symbol gene type direction distance location
XLOC_001806 NA coding upstream 61625 2402308 ~ 2437908 (+)
XLOC_001805 cntnap3 coding upstream 105742 2175583 ~ 2393791 (+)
XLOC_001804 NA coding upstream 508065 1966857 ~ 1991468 (+)
XLOC_001803 NA coding upstream 578513 1904355 ~ 1921020 (+)
XLOC_001802 C3AR1 coding upstream 598871 1899595 ~ 1900662 (+)
XLOC_001808 zmp:0000001301 coding downstream 24995 2529037 ~ 2550378 (+)
XLOC_001809 spina coding downstream 64751 2568793 ~ 2575387 (+)
XLOC_001810 nxnl2 coding downstream 78212 2582254 ~ 2585625 (+)
XLOC_001811 wu:fb59d01 coding downstream 83192 2587234 ~ 2595731 (+)
XLOC_001812 CU856539.2 coding downstream 96788 2600830 ~ 2667208 (+)
XLOC_001799 NA non-coding upstream 786298 1698065 ~ 1713235 (+)
XLOC_001800 NA non-coding upstream 786763 1703905 ~ 1712770 (+)
XLOC_001815 FP085363.1 non-coding downstream 184523 2688565 ~ 2688681 (+)
XLOC_001823 NA non-coding downstream 473493 2977535 ~ 2979504 (+)
XLOC_001827 NA non-coding downstream 758536 3262578 ~ 3269818 (+)
XLOC_001830 CU570980.1 non-coding downstream 904741 3408783 ~ 3408900 (+)
XLOC_001834 NA non-coding downstream 1353025 3857067 ~ 3857885 (+)

Expression



Co-expression Network