XLOC_001814 (setd9)


Basic Information

Item Value
gene id XLOC_001814
gene name setd9
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 2684958 ~ 2691375 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003615
ATGACTGCGGATGAAGACGTGTTCAAATCTCTTGTGTGTTTATTCACACACCTCCTAAAAAACGATGTGAAGAATCAACGCCAGCTGCTCGGGTTACTGCCCAGGTCTACTCAGAGTAAATATAGTAATGTGGAGAGTAAAACACACGGCGCTCCTCCGTCTACAGTGATGTTTGAGACTCTGGGCTTCAGTGTCGAGCGGAAAATCAGCTCTCTGGAGCGTGCGGGAACTGGAGTGTTTGTGATGCGGGGACGCGTGCCGGCAGGAAGCATTGTAGCGATGTATCCAGGAACCATCTATCAGCCAGATGAACCCATCTTTTTCCAATCAGTCAGAAATCCATTTGTATTTAGATGCATAGATGGCATTTTGATTGATGGCAACGATAAATCCATCTCCAAGATAGTGTACCGATCGTGTAGTGGACGGGACAGGTTTGGTCCTCTGCGTCTCAGCGATGGCTCCTGGTTGACGCCTCATCCTGAAAATCCTCTCGCTGTCGGACAATACGTCAACAACTGCTCCAACGGTCAGTCAGGCTGCACTCTTACACATTTCACCATCTACAGCAGACTGATATAA

Function

symbol description
setd9 Orthologous to human SETD9 (SET domain containing 9).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-120727-15 Orthologous to human SETD9 (SET domain containing 9).

Ensembl:

ensembl_id ENSDARG00000074456

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003615 True 582 mRNA 0.48 3 2684958 2691375

Neighbor

gene id symbol gene type direction distance location
XLOC_001813 ccl27b coding upstream 13663 2669405 ~ 2671295 (+)
XLOC_001812 CU856539.2 coding upstream 17750 2600830 ~ 2667208 (+)
XLOC_001811 wu:fb59d01 coding upstream 89227 2587234 ~ 2595731 (+)
XLOC_001810 nxnl2 coding upstream 99333 2582254 ~ 2585625 (+)
XLOC_001809 spina coding upstream 109571 2568793 ~ 2575387 (+)
XLOC_001816 grk5 coding downstream 24173 2715548 ~ 2755378 (+)
XLOC_001817 pnx coding downstream 107910 2799285 ~ 2801857 (+)
XLOC_001818 aebp1 coding downstream 115761 2807136 ~ 2838190 (+)
XLOC_001819 ykt6 coding downstream 149830 2841205 ~ 2850936 (+)
XLOC_001820 ccar2 coding downstream 184645 2876020 ~ 2898402 (+)
XLOC_001807 NA non-coding upstream 180916 2499533 ~ 2504042 (+)
XLOC_001806 NA non-coding upstream 247050 2402308 ~ 2437908 (+)
XLOC_001804 NA non-coding upstream 693490 1966857 ~ 1991468 (+)
XLOC_001803 NA non-coding upstream 763938 1904355 ~ 1921020 (+)
XLOC_001800 NA non-coding upstream 972188 1703905 ~ 1712770 (+)
XLOC_001823 NA non-coding downstream 286160 2977535 ~ 2979504 (+)
XLOC_001827 NA non-coding downstream 571203 3262578 ~ 3269818 (+)
XLOC_001830 CU570980.1 non-coding downstream 717408 3408783 ~ 3408900 (+)
XLOC_001834 NA non-coding downstream 1165692 3857067 ~ 3857885 (+)
XLOC_001839 NA non-coding downstream 1598330 4289705 ~ 4299850 (+)

Expression


Co-expression Network