XLOC_018216 (fam102bb)


Basic Information

Item Value
gene id XLOC_018216
gene name fam102bb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 33752967 ~ 33790003 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035882
CGAGACAGTCTATCACCTACTGCCTGCACATCCACTGACCAGCATATTTCCTTTTAATGCCTTTATCAACCGTAACGATGTAGTTAATGACAGAAGAATCCGACAAGACTGTGTTTCATCATCATCGTCGTTAGCTTAGCTTTTCATTTCAGGCAGTGGCGGATTCCAGCAGTGGCTAACGGCTATCAGCTCCAACAACAGAAGCAACCGAAGATGAGCAAATAAAAGTGATGCTTGTCCACCGCGTATGACCAAAGCTACCGTCAAGGCTTACAGGACTGCTTAGAATTGACGCCAAGATGATGAAGAAAAAGAAGTTTAAGTTCAGAGTGGATTTTGAGCTGGACGAGCTGTCCTCTGTTCCGTTCGTGAACGGAGTTCTGTTCTGTAAAGTCCGACTGCTCGACGGCGGATTCTCAGAAGAATCTTCGCGGGAGACGGTCCAGGCAAACTGTGTACACTGGAGAAAACGATTCTCCTTTCCCTGTAAAATGAGCGCTAACGCTGGAACTGGAGTCCTTGACCCATGTGTGTGTCGAGTTTCGGTCAGAAAGgaacTTAAAGGTGGAAAGACTTATGCGAAGCTGGGTTTTGCTGATCTCAACCTGGCTGAGTTTGCAGGATCGGGTAGCACCACACGCAGGTGTCTGTTGGAGGGTTACGACACCAAAAACACTAGACAGGACAACTCCATCCTTAAGGTGATTATTAGCACACAGCTGATGTCCGGAGACCCCTGTTTCAAAACGCCTCCGTCAACTGCCACCGTAATAGGCATTCAGGGAGATCCTGAGGGCCTACTGGAAGACAGGAAAGGAGGAGACACACAAAAACCTTTTCTGAGCCTCTCAGAGACATCAGGGAAGTGCAGTTCTCTGCCTGATGAGCTGGGGCTCTGCGGACACTCTCGAACGTCCAGTTATGCTAGTCAGCAGTCCAAAGTTTCAGGCTATAGCACGAGTCACTCTCGTTCCTCCAGTCTGTCAGAGTTCTCCCACAGGAGAAACACTTCCATCGGCAGTGCTTCCACTGGCATTGCCAGCATCCCTGAACCCAGTGAGGAGAGCGAGCAAACTACAGTGCCCCCTACTGCCCCGGGAGTCTGCACTGCTGTGCCTGAACACCCATCAACCCCTGACAGAGCTGCCAGCAGATACCCAGTGAAACAGGACTCCATGGAGTCTCAGCTGAAAAGGATGGATGCCACGCGGGTGGATGCAGATGATGTAGTAGAGAAGATCCTGCAAAGCCAGGATTTCACCCACAGTCTGCTGGACTCCAGCGCTGAAGAGGAAGGTCTGCGCTTGTTTGTGGGTCCTGGTGGGAGCACAGCACTTGGTAGTCACCATCTTCCTGCCAGGGTTGGTGCTGGTGCCTACGAACAGGTGGTGATTAAACGCTAGGGTTGAGAGATGCCAGAAGGAAAAGTGTCAAAAACCAAAGTCTGTTTCGTGGGAGGAGAAAATGGACGAA

Function

symbol description
fam102bb Orthologous to human FAM102B (family with sequence similarity 102 member B).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-041014-330 Orthologous to human FAM102B (family with sequence similarity 102 member B).

Ensembl:

ensembl_id ENSDARG00000002333

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035882 True 1473 mRNA 0.51 11 33752967 33790003

Neighbor

gene id symbol gene type direction distance location
XLOC_018215 NA coding downstream 17693 33734853 ~ 33735274 (-)
XLOC_018214 NA coding downstream 24594 33725892 ~ 33728373 (-)
XLOC_018213 NA coding downstream 30762 33720994 ~ 33722205 (-)
XLOC_018212 NA coding downstream 35899 33713540 ~ 33717068 (-)
XLOC_018211 NA coding downstream 41712 33708118 ~ 33711255 (-)
XLOC_018217 atf6 coding upstream 19431 33809434 ~ 33909872 (-)
XLOC_018218 selp coding upstream 158639 33948642 ~ 33966148 (-)
XLOC_018219 sele coding upstream 179427 33969430 ~ 33976937 (-)
XLOC_018220 scyl3 coding upstream 222568 34012571 ~ 34028969 (-)
XLOC_018221 tprb coding upstream 249278 34039281 ~ 34069956 (-)
XLOC_017928 CU539064.1 misc downstream 23699266 10053405 ~ 10053701 (-)
XLOC_018224 NA non-coding upstream 342567 34132570 ~ 34147596 (-)
XLOC_018225 BX248238.1 non-coding upstream 361730 34151733 ~ 34153001 (-)
XLOC_018229 NA non-coding upstream 711767 34501770 ~ 34502671 (-)
XLOC_018230 NA non-coding upstream 725505 34515508 ~ 34536019 (-)
XLOC_018231 NA non-coding upstream 855944 34645947 ~ 34650661 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000325_09400787_09422170 FAM102B, FAM102BB coding CI01000325 null 9400787 ~ 9422170 (-)