XLOC_018232 (slc25a24)


Basic Information

Item Value
gene id XLOC_018232
gene name slc25a24
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 34653916 ~ 34670236 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035908
ccAGCCTAGCCTGCAGGTCTACACATTAAACCCGAAACAGTGCTGAGTTTCAATAGACGGTGGCAATAAAACCATGACAACGATCGTCTAACATTGATAGTCTAGGGagggtctgtttttttttcttccgtcccAGTATAAACATCTGTGCTCTTCCGCAGCTCCACTGCAACCTTTGGAtcggtaaaaaaaaatacataaatacagcATATACATTCATCATGCATCAGCTTATAAGGAAATTCGTCTTCACCGAGTCGCATTGTTTGGAGGAGGAGGACAACACGAAAAGTTTCGCGGAGTTGTTTGAGAAGTTGGATGTGAATAAAGATGGAAAAGTGGATGTTTCCGAGCTCAAGACGGGCCTGGCTGCCATGGGCTTCTCTATGGGTAAAGGAGAAGCGCAGaaaattgttACCTCAGGGGATACCGATAAGGATGAAGGGCTGGACTTTGAGGAGTTTTCAAAGTATCTGAAAGAACATGAGAAAAAACTCAGGCTGACCTTTAAGAGTCTGGACAAAAATGAAGATGGTCGCGTCGATGCCAAAGAGATTCAACAGTCACTAAAAGACCTCGGGATTAACTTGTCAGATAAAGACGCTGAGAAGATCCTCCACAGCATTGATGTGGATGGAACCATGACTCTGGACTGGAATGAATGGAGGGAGCATTTCCTCTTTAACCCTGCAGAAGATCTTCAGCAGATCATACGCTACTGGAAAAAATCAACTGTGTTGGACATAGGTGACAGTCTGACTATACCAGATGAGTTCACCGAGGAGGAGAAGACCACCGGCATGTGGTGGAAACAGCTTGCTGCTGGTGGTGTGGCAGGGGCAGTCTCTCGAACAGGCACCGCCCCCCTTGACAGAATGAAAGTCTTCATGCAGGTTCATTCCTCAAAAACCAACAAAATCAGTCTGGTGAACGGGTTCAAGCAGATGATTAAAGAAGGGGGCGTGGCCTCTCTGTGGAGGGGTAACGGAGTCAACGTTATAAAAATCGCCCCAGAAACTGCAATCAAGTTCATGGCTTATGAGCAGTATAAGAAGCTCCTGAGCAAAGACGGAGGAAAAGTCCAGTCCCACGAGAGGTTCATGGCTGGTTCTCTGGCTGGAGCTACTGCTCAGACAGCCATCTACCCCATGGAGGTAATGAAGACCAGGCTTACTCTGAGGAAGACTGGTCAGTACTCTGGGATGTTTGACTGTGCCAAAAAGATCCTGAGGAAGGAAGGAGTGAAAGCCTTTTATAAAGGCTATGTGCCCAATATTCTGGGAATTATTCCTTATGCTGGAATAGATTTAGCGGTGTATGAGACCTTGAAGAACACCTGGTTGTCTCACTATGCTAAAGACACTGCTAACCCAGGAGTGCTGGTTCTCCTCGGCTGTGGGACCATTTCCAGCACATGCGGACAGTTGGCCAGTTACCCTCTCGCTCTGATCCGCACACGCATGCAGGCCATGGCGTCAATGGAAGGATCAGAGCAGGTGTCTATGTCCAAATTAGTGAAGAAGATCATGCAGAAGGAGGGCTTTTTTGGTCTCTATCGTGGGATCCTGCCCAACTTCATGAAAGTGATCCCCGCTGTCAGCATTAGTTATGTGGTGTATGAGTATATGAGGTCTGGGTTAGGCATCTCTAAATGATGAATGTCTTGCATGTTTTTACACGCACAAATTTCATTCACTTCTCTTTGAAAACACCCTCCATGATGGGACAAAATGTTTTGTTCACttaccaaagtaaaaaaaaaagaagccacgATGGTGTCTTGCATTGTGGTCAGGGCCCAACCTAATTCTTGTTTACACTGATGTATAACTGCACCTTTATATGTAATCGATACatttatgacatgttttacaaTTTGTATGATTTTGTCTTGATATTCATGTAATATCTGAGCAAACGATGAAGCCATTGTgcactatataaatgtgtgtatatatataaatgaatataaatgtttagGTGAATTAGGATGGGCCACAGTCGAGTCTTTACACTatgcagaaaaatatatatatccacatttaaaaaatgagaaaAACAGAATCAATGCAAATCGGGGAGCCACGCAATGACAAGAGCTTAGTGTGCCTTATATCATTAGTTCAGTCTTTGTGAGGGTCTCACTAATTCCTGACCTGGAAAGATCAATGTTATTGAACTTGTGTTGCCTTTTGATCcccattgttttgttattttagaaACTCCTGTTTACATTAAAGGTTGTATTTTAATA
>TCONS_00035909
TGGGCAGTGATGGAGTGAATTGTTATAGTATCATTGCGACGAGAGCAGGAGCAATAGGTCTTGGTTGCGGTTGTCAGGATCTAACGGTGGCATCAGACGAGCTGGCAGCAGACGGTCAGCATGGCTTTACTGCAGGAGCACAGGGGAGAGTGGTTCATCATTGATTTTGAGGACGAAGAGGCTGTGTATGTGATGGATATAGATATGGTGTTGGACATAGGTGACAGTCTGACTATACCAGATGAGTTCACCGAGGAGGAGAAGACCACCGGCATGTGGTGGAAACAGCTTGCTGCTGGTGGTGTGGCAGGGGCAGTCTCTCGAACAGGCACCGCCCCCCTTGACAGAATGAAAGTCTTCATGCAGGTTCATTCCTCAAAAACCAACAAAATCAGTCTGGTGAACGGGTTCAAGCAGATGATTAAAGAAGGGGGCGTGGCCTCTCTGTGGAGGGGTAACGGAGTCAACGTTATAAAAATCGCCCCAGAAACTGCAATCAAGTTCATGGCTTATGAGCAGTATAAGAAGCTCCTGAGCAAAGACGGAGGAAAAGTCCAGTCCCACGAGAGGTTCATGGCTGGTTCTCTGGCTGGAGCTACTGCTCAGACAGCCATCTACCCCATGGAG

Function

symbol description
slc25a24 Predicted to enable ATP transmembrane transporter activity and calcium ion binding activity. Predicted to be involved in several processes, including ATP transport; cellular response to calcium ion; and cellular response to oxidative stress. Predicted to act upstream of or within transmembrane transport. Predicted to be located in mitochondrion. Predicted to be integral component of membrane. Is expressed in several structures, including Kupffer's vesicle; anterior axial hypoblast; hatching gland; periderm; and polster. Orthologous to human SLC25A24 (solute carrier family 25 member 24).

GO:

id name namespace
GO:0071277 cellular response to calcium ion biological_process
GO:0010941 regulation of cell death biological_process
GO:0055085 transmembrane transport biological_process
GO:0034599 cellular response to oxidative stress biological_process
GO:0006839 mitochondrial transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005739 mitochondrion cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0005347 ATP transmembrane transporter activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040912-183 Predicted to enable ATP transmembrane transporter activity and calcium ion binding activity. Predicted to be involved in several processes, including ATP transport; cellular response to calcium ion; and cellular response to oxidative stress. Predicted to act upstream of or within transmembrane transport. Predicted to be located in mitochondrion. Predicted to be integral component of membrane. Is expressed in several structures, including Kupffer's vesicle; anterior axial hypoblast; hatching gland; periderm; and polster. Orthologous to human SLC25A24 (solute carrier family 25 member 24).

Ensembl:

ensembl_id ENSDARG00000008568

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035908 False 2254 mRNA 0.43 10 34653916 34670236
TCONS_00035909 True 627 mRNA 0.51 4 34658555 34663209

Neighbor

gene id symbol gene type direction distance location
XLOC_018231 NA coding downstream 3255 34645947 ~ 34650661 (-)
XLOC_018230 NA coding downstream 117897 34515508 ~ 34536019 (-)
XLOC_018229 NA coding downstream 151245 34501770 ~ 34502671 (-)
XLOC_018228 kifap3a coding downstream 200293 34420623 ~ 34453623 (-)
XLOC_018227 swt1 coding downstream 265585 34343649 ~ 34388331 (-)
XLOC_018233 si:ch211-63o20.7 coding upstream 32174 34702410 ~ 34711528 (-)
XLOC_018234 znf395b coding upstream 67502 34737738 ~ 34754617 (-)
XLOC_018235 paqr8 coding upstream 95947 34766183 ~ 34768301 (-)
XLOC_018236 stmn4 coding upstream 103410 34773646 ~ 34868814 (-)
XLOC_018237 sccpdhb coding upstream 297174 34967410 ~ 34985555 (-)
XLOC_017928 CU539064.1 misc downstream 24600215 10053405 ~ 10053701 (-)
XLOC_018225 BX248238.1 non-coding downstream 500915 34151733 ~ 34153001 (-)
XLOC_018224 NA non-coding downstream 506320 34132570 ~ 34147596 (-)
XLOC_018244 BX510920.3 non-coding upstream 840629 35510865 ~ 35510980 (-)
XLOC_018246 BX510920.2 non-coding upstream 871046 35541282 ~ 35545194 (-)
XLOC_018248 NA non-coding upstream 890421 35560657 ~ 35563832 (-)
XLOC_018254 NA non-coding upstream 1558192 36228428 ~ 36228747 (-)
XLOC_018257 NA non-coding upstream 1749263 36419499 ~ 36617313 (-)

Expression


Co-expression Network