XLOC_018243 (adgrf3b)


Basic Information

Item Value
gene id XLOC_018243
gene name adgrf3b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 35495687 ~ 35512932 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035931
ATGAAGGGACTGTatggagcccagcatttttttacagtgtaagtagtATTGGTTGGATCTAaacattatttttgctgtttgttcaaactacttatttaaaatgagctgaaacaacacagttcttgagttttTTAGCATggcaacttaatagttttatgttcaattcttagttccttcatgttgcccgACACAAATTGATTGTATGGAACACAGCATTTCTTACGgtgtgatttgttttatttagagtGTGAGATAGTTGGCCAAAATACAACGTGCTGGTGTGGACCGGGTTACGTTTGGAGCAATTATGTGTgtgataatgtaaataaatgctgcAATGTGTATCAGTGTGTGGCAAACATATCAAACTTCACACCTCTGTGTCTGCCCATAGCGAATGTTTCACTCATTGGCACGCTCACTGGTAGCTCTTCATCAGTGCAGACCATGctgacGAATGCTTTTAATGTGCTGAATGCCTTCAACTCTTTGACTATGCAAGCCAGCCTCCTCACAGGGTTAAATACATACTCCCACAATTTCACAGTGTCTCTCGGTGCAGTGTTTGCCACCTCCAAAGTTCAAGGCATCATTACTACACTGCTGACAAATCCAGCGATTTACACACTCAATGTTAAGACTCTAGGCTTAGTATACATTGAGGCACCTGCAGGAAAATTATGCTATAATTCAAGACAACAGCTGAACTGTACCTCTATAGAAGCTATGAGCAAATGTGTATGGCAGATGTCCAGAGGCGACGAAGCGCCATTGACTTTGGGACCAGGGAGTGAAATAATGCTTTCAGATACATGTACAGAAATGTCTGCAGTCACGCTTTTAAAGACAAATGGATACTGGTCAGGAACATACAGCTGCCTTTTTGTCACAGACAACGTAGCTCATATGGCAATGGCACCAGTTGATATTGCACTGCTGCCAGAGGCCAGTAATGTGACAAGCAATCCACAAACGATAGACTGCTCTGCATCATCAACCGCTAAAGTTACCATCACATGTTCCATCTTCAACAGCACTGAAACGTACAAGTCCCAACTAAAACTCGGAAGTATGGAAAATCTTACACCAACTAAATTAGAGAGCAATGGTTTAATCAAGTATTCGGCAGATTTCACTGTGAACTGTCTGGCAACAGGAAAACCCCCTTCCCTCACCGCCAGCTGTGTATTAGTGAACTCTTTAAATCAGCAGCGAAATTTCTCAGCAAGCGTATCAGTCATTTACCCCAATGACCTCTTTTGTGCAGCAGAAGTCATTTCTACCAGAACATGGCCAAAAACCAAGAATAATGATACAGCTGTAATAGATTGTACGGCAACAGGGAGACAAGGCACTCTGACACGCAAATGCAATGGAAAAACATGGGGCCAAGAAGTTTCTCTGTGTGTCAAAGCGTTCCTGAGCAATGTAGCTTCACAAGCATCGGATTTTGAAAAAGGACTTGGAGCAACACAAGGGGGCGCACAGTACATCTTTCaaagtttaaaaaacaacacTGCTAGTGAAGAAGATGGTGAGAACAGTTTTGGAGACATCAGCACAGCAGTCAACGTTTTCCAGACTATGAAAGCGGCATCAGTCAATGTTCCACTAGGCGAAAACCTTCTTCCAGATTTCCTGGAATCAGCCAGCAGCATATTGAACGGATCCTGGGAAGTGGGAGACAAGACACAGAGCGGGGCGCTGGCCAGCCAGTATCTGTCATCTGTAGAAGGCCTTGTGAAAAGCATCCGAATAAACACCAGCGAGGGCTACAATGCCTCAAACATCCAGCTGCAGGTCTGCAAAGGTGGCTCCGGTTGCAATAAAACCATTTTCAATGTGGATATTGAGGTGAACGCAACAGCAGATATGGTCAAAACGGTAGGACTACAGAGCTTGGCCAATCTTCTGCCAAAGGTGGGCTACGAAAATTCCCTTTTTCCTAGCATAGTCGTATCCAGCACAGTTGAGAACAACACTCAGGCGTCAGTCAACATCAGACTGGCTTTTCCAAATGAAGAGGGCATCAATGCCGCAATGCAATGTGTTTTCTGGAACGTCTCAGAAGAGAGATGGTCAGACGAGGGCTGCGTGTACGTAAAGGGTCGTGGAGGTGAAGGCTACTGCCAGTGCAACCATCTGACCTCCTTCTCCATGCTCATGTCCAAGTACCCAATAAGCATGCCCTTTCTAGATCAGCTCACATACATCGGACTGGGCGTCTCCATATGCTCTCTGTTGGCCTACATCATCATTGAGTTCTTGGTCTGGTCCGCCGTGGTCAAATCCAATCTTTCCCACTTCCGGCACACCGCACTCGTCAACATCGCTCTCTCTCTGCTATTGGCTGACTGCAGTTTCTTAGCTTCCTCCTTCCCGTCAATCCTAAATGAAACCCTCTGCCTTGTTCTGGTGGTGGCGAAGCATTACTTCTTCCTGGCGATGTTCTTTTGGATGCTTTGTCTGAGTCTCATGCTGGTCCACCAGCTCATTTTCGTTTTCAGCCGCATTGGGAAAAAGGTGTACATGATTCTAGGATTCACCATCGGCTATTTTTGTCCGACGGTGACTGTGGCGGTTACATATGTGTACTACGAAGAAGCAACTAGCATCCCATATTATAGCTCCAAAACCTGCTGGCTCACCTATCAGTCGCCTATGCAGGGATCCATCCACGCTTTTCTGTTTCCTGTTGGGACAATTGTGCTGGTGAACATGTGTTCCATGCTGGTGGTCATAGCAACCGTTTTAAAGCCGTCCGGAGCTGAGACAAACAAAAAGGGGGATAAGGATGCAGCAAAAAGCATCATCAAAGTCATACTCTTCCTCACACCTGTTTTTGGTGGGACTTGGATTCTGGGGCTTTTTGTGTTTCTGATAGATGACTCTTCGCAGTTTATTACATACTTAGTGAATTATTTGTTCACCATTCTCAACTCATTGCAGGGCTTCTTCATCTTGTTGACTGGATGTTTTGCAGAGAAAAGGgtccgagatgaaatattaaaaataattgtggGGaAATCAGCTaaagaacaaaacacaacaacatcCGTTGCAAAATAAATGATCCACACAAGAAAATGCACACAagAAGGAGCATTTAAAACATTGCGGGACACAGACTCATCTCTGAACTCACAGACGCACAAAAATAGTAGATACAGCACAACTGTTTGGTGAAGACCTAAAAGTACTTCTTGTACTTTAAAAGACTTTATCATGCTTGGGACAAAGAACAGGCTCTGGTCATATACAGTACTACACACATTTAGGAACAAACAATGAGAAACGGATACAAAAATATAAGAGATggtcatgtttgtgtttttaaaagaacAATATAAGTACCGCTGTATATATGTAGCAATTATCTATAGTTTTCTACCCTGattgttgttgtattttatttaaaacaatgctGTACATCTGATAAAGGCAATATAAATATGGTCACTTAACTTGATTGTAATATGTTTAGTTTTAGCTCTGCTTCTGTTCTGCGGAACTGTGACATTGATTTCTATGTGCTATTTAGAAATTGTGACGGAATATCTGATGAACCAAAGACAATTTAACACGTATAAACACTCCTCTTCAGCTTGACAAATTATTGTTTCGGTTTTTCTCTTGTTAGACCTATTTCCTTGTTTCTTTTAAAGGGATGTGGAAAAAAGAGAGATGCGATTGTTGATAGCACAACTTTTATTCTGAATAAAAGATAAATCTTGAGCAGACTACTCTGATTCTTTAAAGAAGCATGTTGCATATTACAGAATGATGGTATTCAGATGTCTAGCTTTACTTCTGCCTGTAGATCACTGCAATGATAGCAACAGTAAGTGCTACAGTTCCAACAGCACCCCCAATCAAAACTCCCATAATTCCTCCGTCAATGTGTTGTTTCTCACAAGTGTCTCCTGTGTACACAACAGCCTGTCCAGAGGCACACCTGCA
>TCONS_00035932
ctgacGAATGCTTTTAATGTGCTGAATGCCTTCAACTCTTTGACTATGCAAGCCAGCCTCCTCACAGGGTTAAATACATACTCCCACAATTTCACAGTGTCTCTCGGTGCAGTGTTTGCCACCTCCAAAGTTCAAGGCATCATTACTACACTGCTGACAAATCCAGCGATTTACACACTCAATGTTAAGACTCTAGGCTTAGTATACATTGAGGCACCTGCAGGAAAATTATGCTATAATTCAAGACAACAGCTGAACTGTACCTCTATAGAAGCTATGAGCAAATGTGTATGGCAGATGTCCAGAGGCGACGAAGCGCCATTGACTTTGGGACCAGGGAGTGAAATAATGCTTTCAGATACATGTACAGAAATGTCTGCAGTCACGCTTTTAAAGACAAATGGATACTGGTCAGGAACATACAGCTGCCTTTTTGTCACAGACAACGTAGCTCATATGGCAATGGCACCAGTTGATATTGCACTGCTGCCAGAGGCCAGTAATGTGACAAGCAATCCACAAACGATAGACTGCTCTGCATCATCAACCGCTAAAGTTACCATCACATGTTCCATCTTCAACAGCACTGAAACGTACAAGTCCCAACTAAAACTCGGAAGTATGGAAAATCTTACACCAACTAAATTAGAGAGCAATGGTTTAATCAAGTATTCGGCAGATTTCACTGTGAACTGTCTGGCAACAGGAAAACCCCCTTCCCTCACCGCCAGCTGTGTATTAGTGAACTCTTTAAATCAGCAGCGAAATTTCTCAGCAAGCGTATCAGTCATTTACCCCAATGACCTCTTTTGTGCAGCAGAAGTCATTTCTACCAGAACATGGCCAAAAACCAAGAATAATGATACAGCTGTAATAGATTGTACGGCAACAGGGAGACAAGGCACTCTGACACGCAAATGCAATGGAAAAACATGGGGCCAAGAAGTTTCTCTGTGTGTCAAAGCGTTCCTGAGCAATGTAGCTTCACAAGCATCGGATTTTGAAAAAGGACTTGGAGCAACACAAGGGGGCGCACAGTACATCTTTCaaagtttaaaaaacaacacTGCTAGTGAAGAAGATGGTGAGAACAGTTTTGGAGACATCAGCACAGCAGTCAACGTTTTCCAGACTATGAAAGCGGCATCAGTCAATGTTCCACTAGGCGAAAACCTTCTTCCAGATTTCCTGGAATCAGCCAGCAGCATATTGAACGGATCCTGGGAAGTGGGAGACAAGACACAGAGCGGGGCGCTGGCCAGCCAGTATCTGTCATCTGTAGAAGGCCTTGTGAAAAGCATCCGAATAAACACCAGCGAGGGCTACAATGCCTCAAACATCCAGCTGCAGGTCTGCAAAGGTGGCTCCGGTTGCAATAAAACCATTTTCAATGTGGATATTGAGGTGAACGCAACAGCAGATATGGTCAAAACGGTAGGACTACAGAGCTTGGCCAATCTTCTGCCAAAGGTGGGCTACGAAAATTCCCTTTTTCCTAGCATAGTCGTATCCAGCACAGTTGAGAACAACACTCAGGCGTCAGTCAACATCAGACTGGCTTTTCCAAATGAAGAGGGCATCAATGCCGCAATGCAATGTGTTTTCTGGAACGTCTCAGAAGAGAGATGGTCAGACGAGGGCTGCGTGTACGTAAAGGGTCGTGGAGGTGAAGGCTACTGCCAGTGCAACCATCTGACCTCCTTCTCCATGCTCATGTCCAAGTACCCAATAAGCATGCCCTTTCTAGATCAGCTCACATACATCGGACTGGGCGTCTCCATATGCTCTCTGTTGGCCTACATCATCATTGAGTTCTTGGTCTGGTCCGCCGTGGTCAAATCCAATCTTTCCCACTTCCGGCACACCGCACTCGTCAACATCGCTCTCTCTCTGCTATTGGCTGACTGCAGTTTCTTAGCTTCCTCCTTCCCGTCAATCCTAAATGAAACCCTCTGCCTTGTTCTGGTGGTGGCGAAGCATTACTTCTTCCTGGCGATGTTCTTTTGGATGCTTTGTCTGAGTCTCATGCTGGTCCACCAGCTCATTTTCGTTTTCAGCCGCATTGGGAAAAAGGTGTACATGATTCTAGGATTCACCATCGGCTATTTTTGTCCGACGGTGACTGTGGCGGTTACATATGTGTACTACGAAGAAGCAACTAGCATCCCATATTATAGCTCCAAAACCTGCTGGCTCACCTATCAGTCGCCTATGCAGGGATCCATCCACGCTTTTCTGTTTCCTGTTGGGACAATTGTGCTGGTGAACATGTGTTCCATGCTGGTGGTCATAGCAACCGTTTTAAAGCCGTCCGGAGCTGAGACAAACAAAAAGGGGGATAAGGATGCAGCAAAAAGCATCATCAAAGTCATACTCTTCCTCACACCTGTTTTTGGTGGGACTTGGATTCTGGGGCTTTTTGTGTTTCTGATAGATGACTCTTCGCAGTTTATTACATACTTAGTGAATTATTTGTTCACCATTCTCAACTCATTGCAGGGCTTCTTCATCTTGTTGACTGGATGTTTTGCAGAGAAAAGGGTAGGCATTGCTATTATTTTGATAatcaattatgttattaattactcactctcatgttga

Function

symbol description
adgrf3b Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and cell surface receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in heart; integument; liver; muscle; and pleuroperitoneal region. Orthologous to human ADGRF3 (adhesion G protein-coupled receptor F3).

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0007166 cell surface receptor signaling pathway biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004888 transmembrane signaling receptor activity molecular_function
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041001-207 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and cell surface receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in heart; integument; liver; muscle; and pleuroperitoneal region. Orthologous to human ADGRF3 (adhesion G protein-coupled receptor F3).

Ensembl:

ensembl_id ENSDARG00000093008

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035931 False 3960 mRNA 0.43 14 35495687 35512932
TCONS_00035932 True 2601 mRNA 0.45 9 35500044 35508805

Neighbor

gene id symbol gene type direction distance location
XLOC_018242 pla2g7 coding downstream 24608 35461736 ~ 35471079 (-)
XLOC_018241 fzd3a coding downstream 249537 35208855 ~ 35246150 (-)
XLOC_018240 lft1 coding downstream 419300 35073981 ~ 35076387 (-)
XLOC_018239 kif26bb coding downstream 442864 35013434 ~ 35052823 (-)
XLOC_018238 cnstb coding downstream 483594 34991620 ~ 35012093 (-)
XLOC_018245 adgrf11 coding upstream 4640 35517572 ~ 35536676 (-)
XLOC_018246 BX510920.2 coding upstream 28350 35541282 ~ 35545194 (-)
XLOC_018247 adgrf7 coding upstream 38704 35551636 ~ 35557902 (-)
XLOC_018248 NA coding upstream 47725 35560657 ~ 35563832 (-)
XLOC_018249 adgrf6 coding upstream 55620 35568552 ~ 35706379 (-)
XLOC_017928 CU539064.1 misc downstream 25441986 10053405 ~ 10053701 (-)
XLOC_018231 NA non-coding downstream 845026 34645947 ~ 34650661 (-)
XLOC_018230 NA non-coding downstream 959668 34515508 ~ 34536019 (-)
XLOC_018229 NA non-coding downstream 993016 34501770 ~ 34502671 (-)
XLOC_018225 BX248238.1 non-coding downstream 1342686 34151733 ~ 34153001 (-)
XLOC_018224 NA non-coding downstream 1348091 34132570 ~ 34147596 (-)
XLOC_018254 NA non-coding upstream 715496 36228428 ~ 36228747 (-)
XLOC_018257 NA non-coding upstream 906567 36419499 ~ 36617313 (-)
XLOC_018265 BX004780.1 non-coding upstream 1862982 37375914 ~ 37429416 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G468440 NA non-coding CI01000325 null 10518224 ~ 10518552 (+)