XLOC_001825 (ckmt2a)


Basic Information

Item Value
gene id XLOC_001825
gene name ckmt2a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 3111004 ~ 3129887 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003640
cttagtttaataagttataatgaactaaaaacatatgttggcatgacaaatgtatcatataaatttttacaatgtagttatTAGAAATCAACTATTGTCGGTGCCAATGGTGTAGAGGAAACTGTACTGACACATGCGTTCTAGtgttcacggcgacccgagtttgattcccgctTCAAGGTCCTATcccaatccttcccctctctctgctccccacactttcctgtcaattctctcttctgtcctgtcaaataaatgttaaggtaataaaagaaatcagttattaaaactattatatttaaaaatctgttgAAAATCTCTGATAAGCAACATttggaaaatacattttaaagacttcaaatattaaatcattttgacttcagctgcacATCTTAAAAGTGATTTGCTATTGGGATGAATTAGTAATGGTGGCTGTGAATAAGAGGCTATGTAGAGGTTATAAAGTAGAGTGCAAAGCGCTGGACTATGGCGGCAGGTCTCAAGGACAAGCTGGACGACAGACACGGGTTATGACCTGGCACTCACATGGAAGAGGATTGGCCATCAGGTCGGCTTCTAATCCCATATCCTGGGAGGAGCGCCAGATTCCCGCACAGACTGTGTGCTTCCTGACACTGAGGAGACTCTACAGTGCTGACCCCATCTGAACTTTTTGAGGAGAATCGGTGTGAAGATGGCTGGTTCAATTGGCAAGATGATGTCGAGCCGCACCACTGGCCTGCTCATGGCAAGCCTCGGAGCTGGTGCTTTGGCGACCGGATATATGATGAGTGACAGTGCTGCAATCTCTGCGGACGAGAAGAGGAAACTCTACCCTCCCAGTGCTGACTTCCCTGACCTTCGCAAGCACAACAACTGCATGGCGAGTGCGCTGACCCCGGCCATCTATGCCAAACTGAGGGACAAACTCACTCCCAACAACTGGACTCTTGACCAGTGCATTCAGACTGGTGTGGACAACCCTGGTCATCCCTTCATCAAGACTGTTGGAATGGTCGCTGGTGATGAGGAGAGCTATGAGGTGTTTGCTGAAATCTTTGATCCTGTAATCAAGGACAGACACAATGGCTATGACCCAAGAAACATGAAGCATCCCACTGACCTGGATGCCAGCAAGCTCCATTCAGGCATGTTTGATGAACACTACGTCCTGTCCTCCCGTGTGCGCACAGGCCGCAGCATCCGTGGCCTCAGCCTTCCCCCTGCCTGTAGCCGCGCAGAGCGTCGTGAAGTGGAAAGGGTGGTAATCCAGGCCTTAGCTGGACTGAAGGGAGACCTCTCTGGACGTTACTACAGCCTGACTGAAATGACTGACCATGAGCAGCAGAGACTCATTGATGAGCATTTTCTCTTTGACAAGCCTGTGTCTCCTCTGCTCACTGCATCTGGGATGGCCAGGGACTGGCCTGATGCTCGTGGGATCTGGCACAACAATGAGAAGACCTTCCTGATATGGGTCAATGAGGAAGACCACACCCGTGTCATCTCCATGGAGAAGGGTGGCAACATGAAAAGGGTGTTTGAGAGGTTCTGCAGAGGACTCAAACAGGTGGAACACTTGATTCAGGAGAGGGGCTGGGAGTTCATGTGGAATGAACGTCTTGGCTACGTCTTGACCTGCCCATCCAACCTGGGCACCGGCCTCAGGGCTGGAGTACACGTCCGCTTGCCAAAGCTCAGCAAGGACCCTCGCTTTGGCAAGATCCTGGATAACCTGCGGCTGCAAAAGCGTGGCACTGGAGGTGTGGATACAGCTGCGGTGGGCGATACCTTCGACATCTCAAACCTTGACCGCCTGGGCAAATCCGAGGTGGAACTGGTGCAGCTGGTGGTTGATGGGGTCAACTACCTCATAGAGTGTGAAAAGAGGCTGGAGAAGGGCCAGGATATCAAGGTCCCCGCTCCTTTACAGCAGTTTAAGAAGTGA
>TCONS_00003639
cttagtttaataagttataatgaactaaaaacatatgttggcatgacaaatgtatcatataaatttttacaatgtagttatTAGAAATCAACTATTGTCGGTGCCAATGGTGTAGAGGAAACTGTACTGACACATGCGTTCTAGtgttcacggcgacccgagtttgattcccgctTCAAGGTCCTATcccaatccttcccctctctctgctccccacactttcctgtcaattctctcttctgtcctgtcaaataaatgttaaggtaataaaagaaatcagttattaaaactattatatttaaaaatctgttgAAAATCTCTGATAAGCAACATttggaaaatacattttaaagacttcaaatattaaatcattttgacttcagctgcacATCTTAAAAGTGATTTGCTATTGGGATGAATTAGTAATGGTGGCTGTGAATAAGAGGCTATGTAGAGGTTATAAAGTAGAGTGCAAAGCGCTGGACTATGGCGGCAGGTCTCAAGGACAAGCTGGACGACAGACACGGGTTATGACCTGGCACTCACATGGAAGAGGATTGGCCATCAGGTCGGCTTCTAATCCCATATCCTGGGAGGAGCGCCAGATTCCCGCACAGACTGTGTGCTTCCTGACACTGAGGAGACTCTACAGTGCTGACCCCATCTGAACTTTTTGAGGAGAATCGGTGTGAAGATGGCTGGTTCAATTGGCAAGATGATGTCGAGCCGCACCACTGGCCTGCTCATGGCAAGCCTCGGAGCTGGTGCTTTGGCGACCGGATATATGATGAGTGACAGTGCTGCAATCTCTGCGGACGAGAAGAGGAAACTCTACCCTCCCAGTGCTGACTTCCCTGACCTTCGCAAGCACAACAACTGCATGGCGAGTGCGCTGACCCCGGCCATCTATGCCAAACTGAGGGACAAACTCACTCCCAACAACTGGACTCTTGACCAGTGCATTCAGACTGGTGTGGACAACCCTGGTCATCCCTTCATCAAGACTGTTGGAATGGTCGCTGGTGATGAGGAGAGCTATGAGGTGTTTGCTGAAATCTTTGATCCTGTAATCAAGGACAGACACAATGGCTATGACCCAAGAAACATGAAGCATCCCACTGACCTGGATGCCAGCAAGCTCCATTCAGGCATGTTTGATGAACACTACGTCCTGTCCTCCCGTGTGCGCACAGGCCGCAGCATCCGTGGCCTCAGCCTTCCCCCTGCCTGTAGCCGCGCAGAGCGTCGTGAAGTGGAAAGGGTGGTAATCCAGGCCTTAGCTGGACTGAAGGGAGACCTCTCTGGACGTTACTACAGCCTGACTGAAATGACTGACCATGAGCAGCAGAGACTCATTGATGAGCATTTTCTCTTTGACAAGCCTGTGTCTCCTCTGCTCACTGCATCTGGGATGGCCAGGGACTGGCCTGATGCTCGTGGGATCTGGCACAACAATGAGAAGACCTTCCTGATATGGGTCAATGAGGAAGACCACACCCGTGTCATCTCCATGGAGAAGGGTGGCAACATGAAAAGGGTGTTTGAGAGGTTCTGCAGAGGACTCAAACAGGTGGAACACTTGATTCAGGAGAGGGGCTGGGAGTTCATGTGGAATGAACGTCTTGGCTACGTCTTGACCTGCCCATCCAACCTGGGCACCGGCCTCAGGGCTGGAGTACACGTCCGCTTGCCAAAGCTCAGCAAGGACCCTCGCTTTGGCAAGATCCTGGATAACCTGCGGCTGCAAAAGCGTGGCACTGGAGGTGTGGATACAGCTGCGGTGGGCGATACCTTCGACATCTCAAACCTTGACCGCCTGGGCAAATCCGAGGTGGAACTGGTGCAGCTGGTGGTTGATGGGGTCAACTACCTCATAGAGTGTGAAAAGAGGCTGGAGAAGGGCCAGGATATCAAGGTCCCCGCTCCTTTACAGCAGTTTAAGAAGTGA
>TCONS_00003638
cttagtttaataagttataatgaactaaaaacatatgttggcatgacaaatgtatcatataaatttttacaatgtagttatTAGAAATCAACTATTGTCGGTGCCAATGGTGTAGAGGAAACTGTACTGACACATGCGTTCTAGtgttcacggcgacccgagtttgattcccgctTCAAGGTCCTATcccaatccttcccctctctctgctccccacactttcctgtcaattctctcttctgtcctgtcaaataaatgttaaggtaataaaagaaatcagttattaaaactattatatttaaaaatctgttgAAAATCTCTGATAAGCAACATttggaaaatacattttaaagacttcaaatattaaatcattttgacttcagctgcacATCTTAAAAGTGATTTGCTATTGGGATGAATTAGTAATGGTGGCTGTGAATAAGAGGCTATGTAGAGGTTATAAAGTAGAGTGCAAAGCGCTGGACTATGGCGGCAGGTCTCAAGGACAAGCTGGACGACAGACACGGGTTATGACCTGGCACTCACATGGAAGAGGATTGGCCATCAGGTCGGCTTCTAATCCCATATCCTGGGAGGAGCGCCAGATTCCCGCACAGACTGTGTGCTTCCTGACACTGAGGAGACTCTACAGTGCTGACCCCATCTGAACTTTTTGAGGAGAATCGGTGTGAAGATGGCTGGTTCAATTGGCAAGATGATGTCGAGCCGCACCACTGGCCTGCTCATGGCAAGCCTCGGAGCTGGTGCTTTGGCGACCGGATATATGATGAGTGACAGTGCTGCAATCTCTGCGGACGAGAAGAGGAAACTCTACCCTCCCAGTGCTGACTTCCCTGACCTTCGCAAGCACAACAACTGCATGGCGAGTGCGCTGACCCCGGCCATCTATGCCAAACTGAGGGACAAACTCACTCCCAACAACTGGACTCTTGACCAGTGCATTCAGACTGGTGTGGACAACCCTGGTCATCCCTTCATCAAGACTGTTGGAATGGTCGCTGGTGATGAGGAGAGCTATGAGGTGTTTGCTGAAATCTTTGATCCTGTAATCAAGGACAGACACAATGGCTATGACCCAAGAAACATGAAGCATCCCACTGACCTGGATGCCAGCAAGCTCCATTCAGGCATGTTTGATGAACACTACGTCCTGTCCTCCCGTGTGCGCACAGGCCGCAGCATCCGTGGCCTCAGCCTTCCCCCTGCCTGTAGCCGCGCAGAGCGTCGTGAAGTGGAAAGGGTGGTAATCCAGGCCTTAGCTGGACTGAAGGGAGACCTCTCTGGACGTTACTACAGCCTGACTGAAATGACTGACCATGAGCAGCAGAGACTCATTGATGACCACTTCCTGTTTGACAAACCTGTTTCCCCCTTGTTGACTTGCGCCTTTATGGCCCGCGACTGGCCAGATGCAAGAGGCATCTGGCACAACAATGAGAAGACCTTCCTGATATGGGTCAATGAGGAAGACCACACCCGTGTCATCTCCATGGAGAAGGGTGGCAACATGAAAAGGGTGTTTGAGAGGTTCTGCAGAGGACTCAAACAGGTGGAACACTTGATTCAGGAGAGGGGCTGGGAGTTCATGTGGAATGAACGTCTTGGCTACGTCTTGACCTGCCCATCCAACCTGGGCACCGGCCTCAGGGCTGGAGTACACGTCCGCTTGCCAAAGCTCAGCAAGGACCCTCGCTTTGGCAAGATCCTGGATAACCTGCGGCTGCAAAAGCGTGGCACTGGAGGTGTGGATACAGCTGCGGTGGGCGATACCTTCGACATCTCAAACCTTGACCGCCTGGGCAAATCCGAGGTGGAACTGGTGCAGCTGGTGGTTGATGGGGTCAACTACCTCATAGAGTGTGAAAAGAGGCTGGAGAAGGGCCAGGATATCAAGGTCCCCGCTCCTTTACAGCAGTTTAAGAAGTGA
>TCONS_00003641
ATGGCCCGCGACTGGCCAGATGCAAGAGGCATCTGGCACAACAATGAGAAGACCTTCCTGATATGGGTCAATGAGGAAGACCACACCCGTGTCATCTCCATGGAGAAGGGTGGCAACATGAAAAGGGTGTTTGAGAGGTTCTGCAGAGGACTCAAACAGGTGGAACACTTGATTCAGGAGAGGGGCTGGGAGTTCATGTGGAATGAACGTCTTGGCTACGTCTTGACCTGCCCATCCAACCTGGGCACCGGCCTCAGGGCTGGAGTACACGTCCGCTTGCCAAAGCTCAGCAAGGACCCTCGCTTTGGCAAGATCCTGGATAACCTGCGGCTGCAAAAGCGTGGCACTGGAGGTGTGGATACAGCTGCGGTGGGCGATACCTTCGACATCTCAAACCTTGACCGCCTGGGCAAATCCGAGGTGGAACTGGTGCAGCTGGTGGTTGATGGGGTCAACTACCTCATAGAGTGTGAAAAGAGGCTGGAGAAGGGCCAGGATATCAAGGTCCCCGCTCCTTTACAGCAGTTTAAGAAGTGA

Function

symbol description
ckmt2a Predicted to enable creatine kinase activity. Predicted to be involved in phosphocreatine biosynthetic process. Predicted to act upstream of or within phosphorylation. Predicted to be active in mitochondrion. Is expressed in myotome and retina. Orthologous to human CKMT2 (creatine kinase, mitochondrial 2).

GO:

id name namespace
GO:0046314 phosphocreatine biosynthetic process biological_process
GO:0016310 phosphorylation biological_process
GO:0005739 mitochondrion cellular_component
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0016772 transferase activity, transferring phosphorus-containing groups molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0016301 kinase activity molecular_function
GO:0004111 creatine kinase activity molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-5717 Predicted to enable creatine kinase activity. Predicted to be involved in phosphocreatine biosynthetic process. Predicted to act upstream of or within phosphorylation. Predicted to be active in mitochondrion. Is expressed in myotome and retina. Orthologous to human CKMT2 (creatine kinase, mitochondrial 2).

Ensembl:

ensembl_id ENSDARG00000069615

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003640 False 1948 mRNA 0.49 10 3111004 3129887
TCONS_00003639 False 1948 mRNA 0.49 10 3111004 3129887
TCONS_00003638 False 1948 mRNA 0.49 10 3111004 3129887
TCONS_00003641 True 537 mRNA 0.55 5 3127809 3129887

Neighbor

gene id symbol gene type direction distance location
XLOC_001824 rasgrf2a coding upstream 4242 3049636 ~ 3106762 (+)
XLOC_001822 zfyve16 coding upstream 84481 2975974 ~ 3026523 (+)
XLOC_001823 NA coding upstream 131500 2977535 ~ 2979504 (+)
XLOC_001821 erap1a coding upstream 189707 2899108 ~ 2921297 (+)
XLOC_001820 ccar2 coding upstream 212602 2876020 ~ 2898402 (+)
XLOC_001826 hic2 coding downstream 15820 3145707 ~ 3155957 (+)
XLOC_001827 NA coding downstream 132691 3262578 ~ 3269818 (+)
XLOC_001828 zgc:56235 coding downstream 169942 3299829 ~ 3322338 (+)
XLOC_001829 brap coding downstream 206885 3336772 ~ 3359189 (+)
XLOC_001830 CU570980.1 coding downstream 278896 3408783 ~ 3408900 (+)
XLOC_001815 FP085363.1 non-coding upstream 422323 2688565 ~ 2688681 (+)
XLOC_001807 NA non-coding upstream 606962 2499533 ~ 2504042 (+)
XLOC_001806 NA non-coding upstream 673096 2402308 ~ 2437908 (+)
XLOC_001804 NA non-coding upstream 1119536 1966857 ~ 1991468 (+)
XLOC_001834 NA non-coding downstream 727180 3857067 ~ 3857885 (+)
XLOC_001839 NA non-coding downstream 1159818 4289705 ~ 4299850 (+)
XLOC_001840 NA non-coding downstream 1185076 4314963 ~ 4318863 (+)

Expression


Co-expression Network