XLOC_018253 (BX255920.1)


Basic Information

Item Value
gene id XLOC_018253
gene name BX255920.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 36220847 ~ 36227500 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035944
AGAATGGACATAAGgAAACCCACAGAGAGTGAGTCATTCTGGAGTTTTGGAAAAGAACGGGACTTCAAACCTCACATTACACACATTGAGCCTGTGCTCACTGAATGTGACCTTGACTGGAAATCCCATATGCGCTGGATACCTGAACCTCGATACAGCGATGCCCCATTTCCACACATCAAAGACATAAAGTTTCCAAGTGAAAGAAAACTCATGAGATCATTCCCACAGGCTAATATGGTGTCTGGGTCTGAATGGAGTTTTTATCCAAACCTTGGACAGCCCAAAACCTATCACAATGGAAAAAGATGTTATATGGATGGCATTAATCATACAAGAAGCACAAGATGCATTTCAGAAAATTCTCTGGAATCATCCATAGGGAAGAAAAAGCAGGTGACAGACAAATACAGCAATTACCCATCAAGAAAGGTCAGACCATTTCTAGTTCCAGAGTACAGCCCTGACTTTCATAAATGTGAATCAGCAGCATGGTGCACAACCAATTATGGGTCCAGTTATTGTGGCGCATTGAAGTCACTTATTCACTTAAAACCCCCAACAAAATATAAAAGGCCACCATATGCAGAGAATCATAAAGGTCGTGTGCGAGAGGAGGATATTCTTGAAGTCAAGAGTTTAAACAGTTGGAGACCAGCACCAGACATCTATGACAGGACAGTTCTGCAGGATATGTAATTTGAAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105234

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035944 True 706 mRNA 0.42 7 36220847 36227500

Neighbor

gene id symbol gene type direction distance location
XLOC_018252 ptchd4 coding downstream 113425 36066408 ~ 36107422 (-)
XLOC_018251 tnfrsf21 coding downstream 379277 35797998 ~ 35841570 (-)
XLOC_018250 adgrf8 coding downstream 470037 35719375 ~ 35750810 (-)
XLOC_018249 adgrf6 coding downstream 514468 35568552 ~ 35706379 (-)
XLOC_018248 NA coding downstream 657015 35560657 ~ 35563832 (-)
XLOC_018254 NA coding upstream 928 36228428 ~ 36228747 (-)
XLOC_018255 si:dkey-1j5.4 coding upstream 152766 36380266 ~ 36393555 (-)
XLOC_018256 lbr coding upstream 166412 36393912 ~ 36416922 (-)
XLOC_018257 NA coding upstream 191999 36419499 ~ 36617313 (-)
XLOC_018258 slc5a6a coding upstream 419261 36646761 ~ 36671660 (-)
XLOC_017928 CU539064.1 misc downstream 26167146 10053405 ~ 10053701 (-)
XLOC_018246 BX510920.2 non-coding downstream 675653 35541282 ~ 35545194 (-)
XLOC_018244 BX510920.3 non-coding downstream 709867 35510865 ~ 35510980 (-)
XLOC_018231 NA non-coding downstream 1570186 34645947 ~ 34650661 (-)
XLOC_018230 NA non-coding downstream 1684828 34515508 ~ 34536019 (-)
XLOC_018265 BX004780.1 non-coding upstream 1148414 37375914 ~ 37429416 (-)
XLOC_018268 BX088644.1 non-coding upstream 1382551 37610051 ~ 37611589 (-)
XLOC_018274 NA non-coding upstream 1900397 38127897 ~ 38140616 (-)

Expression


Co-expression Network