XLOC_018254



Basic Information


Item Value
gene id XLOC_018254
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 36228428 ~ 36228747 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00036487
atgtatatgtatatgtgtatatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtatggtatgtatgtatgtatgtatgtgtgtgcgccaaattctgaagaaacatcttgatacatttttaataaacgtaatacaaataaaattataaatataaaattgcacaagacgtgtatatatatgaaatgtataatcatctcactcatgtcttgctgtttgtgcaattgattttgttcaagtttatttaaaaataagtttgactttatacttctgcaa

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00036487 True 278 lncRNA 0.27 2 36228428 36228747

Neighbor


gene id symbol gene type direction distance location
XLOC_018253 BX255920.1 coding downstream 928 36220847 ~ 36227500 (-)
XLOC_018252 ptchd4 coding downstream 121006 36066408 ~ 36107422 (-)
XLOC_018251 tnfrsf21 coding downstream 386858 35797998 ~ 35841570 (-)
XLOC_018250 adgrf8 coding downstream 477618 35719375 ~ 35750810 (-)
XLOC_018249 adgrf6 coding downstream 522049 35568552 ~ 35706379 (-)
XLOC_018255 si:dkey-1j5.4 coding upstream 151519 36380266 ~ 36393555 (-)
XLOC_018256 lbr coding upstream 165165 36393912 ~ 36416922 (-)
XLOC_018257 NA coding upstream 190752 36419499 ~ 36617313 (-)
XLOC_018258 slc5a6a coding upstream 418014 36646761 ~ 36671660 (-)
XLOC_018259 rpl7l1 coding upstream 446336 36675083 ~ 36679233 (-)
XLOC_017928 CU539064.1 misc downstream 26174727 10053405 ~ 10053701 (-)
XLOC_018248 NA non-coding downstream 664596 35560657 ~ 35563832 (-)
XLOC_018246 BX510920.2 non-coding downstream 683234 35541282 ~ 35545194 (-)
XLOC_018244 BX510920.3 non-coding downstream 717448 35510865 ~ 35510980 (-)
XLOC_018231 NA non-coding downstream 1577767 34645947 ~ 34650661 (-)
XLOC_018230 NA non-coding downstream 1692409 34515508 ~ 34536019 (-)
XLOC_018265 BX004780.1 non-coding upstream 1147167 37375914 ~ 37429416 (-)
XLOC_018268 BX088644.1 non-coding upstream 1381304 37610051 ~ 37611589 (-)
XLOC_018274 NA non-coding upstream 1899150 38127897 ~ 38140616 (-)
XLOC_018275 NA non-coding upstream 1907524 38136271 ~ 38136792 (-)

Expression



Co-expression Network