XLOC_018277



Basic Information


Item Value
gene id XLOC_018277
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 38358361 ~ 38373094 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00036929
GAAAATCTGGACATGATGAGAGAGAGtagcaggggcggatttaaccaataagcgagTCAGGTCTTCTGAATGTAGTACCTGACAGGACTAGAAGGAGTTTGGCTGAGAATCGGCATGTAATCGACCTCTGAATCTCCAGGCCTCAAGGGTTCCATCTCAAAGccccagacagacagacagacagcacaaGAGAAAGCTGCACATTCAACATTAGGTCTGGAGAACAGGAATCAGAGCTGTTGAGGGACGGACTGCTCCCTGTAGCCTGAGACAACAAGAGTAACAGAGAtcacaaaaagaaaatgtaaaggttttaaaTTTACTTACGCCAACAAATTGTGTCTTTCTATAAAGCATGTTTGTACTACTCATTACAAGGGTATACTTAAAGGTCCA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00036929 True 396 lncRNA 0.44 2 38358361 38373094

Neighbor


gene id symbol gene type direction distance location
XLOC_018276 NA coding downstream 113400 38243292 ~ 38244961 (-)
XLOC_018274 NA coding downstream 217745 38127897 ~ 38140616 (-)
XLOC_018275 NA coding downstream 221569 38136271 ~ 38136792 (-)
XLOC_018273 angel2 coding downstream 424046 37920096 ~ 37934315 (-)
XLOC_018272 si:ch211-147d7.5 coding downstream 526422 37831352 ~ 37831939 (-)
XLOC_018278 itpkb coding upstream 13188 38386282 ~ 38449903 (-)
XLOC_018279 BX569783.1 coding upstream 131639 38504733 ~ 38508521 (-)
XLOC_018280 si:ch211-245h14.1 coding upstream 144347 38517441 ~ 38525467 (-)
XLOC_018281 slc30a2 coding upstream 222841 38595935 ~ 38617766 (-)
XLOC_018282 NA coding upstream 291670 38664764 ~ 38671060 (-)
XLOC_017928 CU539064.1 misc downstream 28304660 10053405 ~ 10053701 (-)
XLOC_018268 BX088644.1 non-coding downstream 746772 37610051 ~ 37611589 (-)
XLOC_018265 BX004780.1 non-coding downstream 928945 37375914 ~ 37429416 (-)
XLOC_018288 dre-mir-124-2 non-coding upstream 532437 38905531 ~ 38905613 (-)
XLOC_018289 BX569784.1 non-coding upstream 659727 39032821 ~ 39032936 (-)
XLOC_018296 NA non-coding upstream 1002789 39375883 ~ 39502967 (-)

Expression



Co-expression Network