XLOC_018297 (si:dkey-217m5.8)


Basic Information

Item Value
gene id XLOC_018297
gene name si:dkey-217m5.8
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 39389777 ~ 39391833 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036024
AGAAAAAATGAGAAACGTCTTCATGACATAAACAAGGAATTCAACAAAAACATTCACATGAATGACCCCAGCCAGGTTGTTTTAGaaAATCCGTTGTCCACAGAGAAGGTCATGGACTTGTCACTTGACCACTGACAGCACTGCCAGAAAATATTGTGGCTGCACAAATGACTGCTGCATCACCAGGCATATCATCTGTCACATCTCCTCAGTCATCagtaccaattacagaaaaatctGCTTGTGAACCTACTAAGCCTTGGGAGAGGGACTGGCATCCATTACAAGAAAAACTGctTGATTATGTGCTGGAGCGAAATCGGCCTGGCAGTGAAATATTTGTGAAGGAGGGGCAAGTGTGCCTTATTCGAGAAGAATTTTGGAGTCTTGTATTGCTAAGGGACATGGACTCCCATATTGGAAACGCCTGCATGAAGCTTATTTGTGAAATGGCTCGGCAAATTGGCAAGGACATATACATTGAGGACTTTTATGTTGTCCCTGTGTGGAAAACAACTCCTAACAACATTGTTACTGGATTACCGGAAGATGCAGACTTGAAAGACCTGTTAGCCTTTCCAGCATGGACAAATGCAAATGGACCAGACCACTTCGTTGTCTGTGAAAATTGCTTACCAAGTTGATCATGGGACATGGACTGAAAAGACTGGATATGATTTTCCAG
>TCONS_00036025
ATGACTGCTGCATCACCAGGCATATCATCTGTCACATCTCCTCAGTCATCagtaccaattacagaaaaatctGCTTGTGAACCTACTAAGCCTTGGGAGAGGGACTGGCATCCATTACAAGAAAAACTGctTGATTATGTGCTGGAGCGAAATCGGCCTGGCAGTGAAATATTTGTGAAGGAGGGGCAAGTGTGCCTTATTCGAGAAGAATTTTGGAGTCTTGTATTGCTAAGGGACATGGACTCCCATATTGGAAACGCCTGCATGAAGCTTATTTGTGAAATGGCTCGGCAAATTGGCAAGGACATATACATTGAGGACTTTTATGTTGTCCCTGTGTGGAAAACAACTCCTAACAACATTGTTACTGGATTACCGGAAGATGCAGACTTGAAAGACCTGTTAGCCTTTCCAGCATGGACAAATGCAAATGGACCAGACCACTTCGTTGTCTGTGAAAATTGCTTACCAAGTTGA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-041014-319 No description available

Ensembl:

ensembl_id ENSDARG00000093697

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036024 False 685 mRNA 0.43 8 39389777 39391833
TCONS_00036025 True 477 mRNA 0.44 6 39389818 39391492

Neighbor

gene id symbol gene type direction distance location
XLOC_018295 pbk coding downstream 21698 39359729 ~ 39368079 (-)
XLOC_018294 ccdc25 coding downstream 45647 39338700 ~ 39344130 (-)
XLOC_018293 ccl38.1 coding downstream 55978 39332579 ~ 39333799 (-)
XLOC_018292 clu coding downstream 115790 39260475 ~ 39273987 (-)
XLOC_018291 cyp39a1 coding downstream 170240 39190854 ~ 39219537 (-)
XLOC_018298 NA coding upstream 12376 39404209 ~ 39404969 (-)
XLOC_018299 NA coding upstream 19011 39410844 ~ 39414258 (-)
XLOC_018300 SLC35D3 coding upstream 121602 39513435 ~ 39517164 (-)
XLOC_018301 pex7 coding upstream 128795 39520628 ~ 39582316 (-)
XLOC_018302 hey2 coding upstream 197064 39588897 ~ 39596338 (-)
XLOC_017928 CU539064.1 misc downstream 29336076 10053405 ~ 10053701 (-)
XLOC_018289 BX569784.1 non-coding downstream 356841 39032821 ~ 39032936 (-)
XLOC_018288 dre-mir-124-2 non-coding downstream 484164 38905531 ~ 38905613 (-)
XLOC_018282 NA non-coding downstream 718717 38664764 ~ 38671060 (-)
XLOC_018279 BX569783.1 non-coding downstream 881256 38504733 ~ 38508521 (-)
XLOC_018277 NA non-coding downstream 1016683 38358361 ~ 38373094 (-)
XLOC_018303 BX936317.1 non-coding upstream 210023 39601856 ~ 39686127 (-)
XLOC_018305 NA non-coding upstream 352362 39744195 ~ 39746437 (-)
XLOC_018308 CR847530.1 non-coding upstream 527399 39919232 ~ 39920174 (-)

Expression


Co-expression Network