XLOC_018300 (SLC35D3)


Basic Information

Item Value
gene id XLOC_018300
gene name SLC35D3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 39513435 ~ 39517164 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036031
ATGCTTTGCAAAGGACGCATGCTGGGCATCACCGTCGCCGTTGCTCACGGATTCTTTTCGGGGTCGCTAAATATTCTGCTAAAATTCCTTATCACGACCTACAGCTTCACGTATCTGACTTTAATTCAGTGTCTGACCAGCGGCACTGCGGCGCTCACGCTAGAGGTGCTGAGGAGACTAGGCAAGATAGATATACCTCCGTTCAGTCTACAGTTGGTTAAAGTTTTTGCGAGCGTGTGTATTTTGGCAACTTTGCAGTCCACGTTGACTCTGTGGTCTCTCAGGGGACTGAGTTTGCCCATGTATGTGGTGTTTAAGCGATGCCTGCCCTTGGTGACGCTGGGGATTGGAGTGTGTGTGTTGAAGAACGGGATCCCGTCAGCTGGAGTCATCACAGCGGTCCTCATCACCACTGGAGGAGCAGCTCTGGCTGGTGCTGGAGATCTTACAGGTGACCCTTTCGGCTACGTGACTGGCATTTTAGCTGTGATCGTCCACGCCTCCTACTTGGTGCTCATCCAGAAAGTGAGTTCAGACAGTGATTACGGGCCGCTCACGGCGCAGTACACCATTGCAGTGGTGGCTACCCCTGTTCTCTTCATCTGCTCCATTGTAAGCATGGATGCTATTGATATGTGGACATACGAAGGCTGGAAGAACCCGTTCATCACTGGTATCTTCGTTACCTGCATCCTCATTGGCTGTGCGATGAACTTCACCACGCTTCACTGTACTTATATAAACTCGGCCGTCACCACCAGTTTTGTTGGAGTGGTCAAAAGCATAGCTACTATCACTGTGGGCATGCTGGCCTTCAGTGACGTGATGCCCACCAAACTGTTTGTGGCAGGCGTGGTAGTCAACACCGTCGGCTCCGTCACCTACTGTGTGGTGAAGTATTTCGAAACCAAAAAAAAGGTAGCCTACCAGGATATGGATGAGTCCCCAGCCAAGCCTGATGGAGATACGATGGAGATTCCTTCAAATATCCCAGAAGATGTTCCCAATGGTGGCCTGTCAGAATCAGCAGACCAGAATCATATTCGTGAAAATAAAGTAGCAGAGTCTATAGAATTAGAACGGCCCGCCGTCCCGTCAGATGATCCCACGAGACTGTCTCTGAGCGATAGTTATGTTGGGGTTTGGAGATCCGTTCGCACCTTAAAGTTCCTCAAGAAAGACACTTTAATCGACAACATGGAGGTTCAAAGTCCTTGA

Function

symbol description
slc35d3 Predicted to enable antiporter activity and pyrimidine nucleotide-sugar transmembrane transporter activity. Predicted to be involved in carbohydrate transport and pyrimidine nucleotide-sugar transmembrane transport. Predicted to act upstream of or within energy homeostasis and positive regulation of protein exit from endoplasmic reticulum. Predicted to be located in early endosome and endoplasmic reticulum. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000107442

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036031 True 1218 mRNA 0.50 4 39513435 39517164

Neighbor

gene id symbol gene type direction distance location
XLOC_018296 NA coding downstream 10468 39375883 ~ 39502967 (-)
XLOC_018299 NA coding downstream 99177 39410844 ~ 39414258 (-)
XLOC_018298 NA coding downstream 108466 39404209 ~ 39404969 (-)
XLOC_018297 si:dkey-217m5.8 coding downstream 121602 39389777 ~ 39391833 (-)
XLOC_018295 pbk coding downstream 145356 39359729 ~ 39368079 (-)
XLOC_018301 pex7 coding upstream 3464 39520628 ~ 39582316 (-)
XLOC_018302 hey2 coding upstream 71733 39588897 ~ 39596338 (-)
XLOC_018303 BX936317.1 coding upstream 84692 39601856 ~ 39686127 (-)
XLOC_018304 tpd52l1 coding upstream 174629 39691793 ~ 39735987 (-)
XLOC_018305 NA coding upstream 227031 39744195 ~ 39746437 (-)
XLOC_017928 CU539064.1 misc downstream 29459734 10053405 ~ 10053701 (-)
XLOC_018289 BX569784.1 non-coding downstream 480499 39032821 ~ 39032936 (-)
XLOC_018288 dre-mir-124-2 non-coding downstream 607822 38905531 ~ 38905613 (-)
XLOC_018308 CR847530.1 non-coding upstream 402068 39919232 ~ 39920174 (-)
XLOC_018309 NA non-coding upstream 698205 40215369 ~ 40254485 (-)
XLOC_018311 NA non-coding upstream 812942 40330106 ~ 40336899 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000029_02114824_02116942 SLC35D3 coding CI01000029 null 2114592 ~ 2119568 (-)