XLOC_018338



Basic Information


Item Value
gene id XLOC_018338
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 42849227 ~ 42852330 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00036497
GAAGCAGCCTGTGAAGCAGAGGCTGAAGAAAAAAGCTTCAGCAGTTGGAAGCAGGAGGAATGGGTGGTCGGTTGAAAGAAGAGCCACAACAATGCATCCAAAGATGAAGCAGTTGTTATAGTTAAGAAACTCCTCGCCGTTGAGTACTAGCCTGTTCTGCTTCTCAGCAAGGAGACTAAGAACAAAGAACACAAATGTGAAATATTGACCCCTCGGTGCACACTTTCCACTTATGCCCAAGACTACCTTCAGAAGATTGGCTCATTTTCTCAACACTTTTGTGAAGGAGCTGCTGGAGGAGGCGACTGATGGAGAGCCAAGTGCAGCAGGTGACCATTTAAGGAGCAGGTGGAGGAGGTGAccttgggcacgaccatttctcctatgaccaaacgtcttgtgcagagctgcagtttaggcgcctgaggctggagaacgctagacgtccatcgtggagaagctgcaggtgggagtgGTCACCAGCTGGTGTAccttcaggatcaatgcgaggactcgtctgtcactggagtcttacaggaatcagtctcatgctctccactcctccatgaccaccacagcagctgcttagGATACGGCCTGGCTCAGGATTTTAGAAACCTTGg

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00036497 True 623 lncRNA 0.51 3 42849227 42852330

Neighbor


gene id symbol gene type direction distance location
XLOC_018337 NA coding downstream 30114 42806763 ~ 42819113 (-)
XLOC_018336 NA coding downstream 47802 42793559 ~ 42801425 (-)
XLOC_018335 NA coding downstream 88563 42757575 ~ 42760664 (-)
XLOC_018334 ttll2 coding downstream 98956 42748295 ~ 42750271 (-)
XLOC_018333 plg coding downstream 146343 42688488 ~ 42702884 (-)
XLOC_018339 AL845420.2 coding upstream 114944 42967274 ~ 42967388 (-)
XLOC_018340 pomcb coding upstream 116455 42968785 ~ 42972599 (-)
XLOC_018341 snx9b coding upstream 164107 43016437 ~ 43079481 (-)
XLOC_018342 AL845420.1 coding upstream 230619 43082949 ~ 43083067 (-)
XLOC_018343 afdna coding upstream 267802 43120132 ~ 43389320 (-)
XLOC_017928 CU539064.1 misc downstream 32795526 10053405 ~ 10053701 (-)
XLOC_018330 AL845314.1 non-coding downstream 444015 42405098 ~ 42405212 (-)
XLOC_018328 NA non-coding downstream 607771 42220734 ~ 42241456 (-)
XLOC_018344 NA non-coding upstream 545393 43397723 ~ 43411607 (-)
XLOC_018345 AL928920.1 non-coding upstream 554377 43406707 ~ 43407505 (-)
XLOC_018360 NA non-coding upstream 1240573 44092903 ~ 44095025 (-)

Expression



Co-expression Network