XLOC_001842 (dre-mir-430a-1)


Basic Information

Item Value
gene id XLOC_001842
gene name dre-mir-430a-1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 4493277 ~ 4493358 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003658
GTCACTATCGGTGCCCTCACAAAGGCACTGACTTGGATGCTGCATGTGGTAAGTGCTATTTGTTGGGGTAGTTTCAAGTGAC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000083624

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003658 True 82 miRNA 0.49 1 4493277 4493358

Neighbor

gene id symbol gene type direction distance location
XLOC_001841 NA coding upstream 151631 4335192 ~ 4341646 (+)
XLOC_001840 NA coding upstream 174414 4314963 ~ 4318863 (+)
XLOC_001839 NA coding upstream 193427 4289705 ~ 4299850 (+)
XLOC_001838 plppr1 coding upstream 234003 4235998 ~ 4259274 (+)
XLOC_001837 mn1a coding upstream 380441 4095917 ~ 4112836 (+)
XLOC_001843 plk2a coding downstream 6585 4499943 ~ 4508530 (+)
XLOC_001844 palm2akap2 coding downstream 312965 4806323 ~ 4831218 (+)
XLOC_001845 NA coding downstream 316525 4809883 ~ 4810251 (+)
XLOC_001846 palm2akap2 coding downstream 381184 4874542 ~ 4911001 (+)
XLOC_001847 slc46a2 coding downstream 431030 4924388 ~ 4934610 (+)
XLOC_001834 NA non-coding upstream 635392 3857067 ~ 3857885 (+)
XLOC_001830 CU570980.1 non-coding upstream 1084377 3408783 ~ 3408900 (+)
XLOC_001848 NA non-coding downstream 468457 4961815 ~ 4963300 (+)
XLOC_001850 CU074419.1 non-coding downstream 492692 4986050 ~ 4987483 (+)
XLOC_001851 NA non-coding downstream 494408 4987766 ~ 4996049 (+)
XLOC_001857 NA non-coding downstream 738969 5232327 ~ 5234250 (+)

Expression


Co-expression Network