XLOC_018485 (si:ch211-221n20.2)


Basic Information

Item Value
gene id XLOC_018485
gene name si:ch211-221n20.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 52639377 ~ 52642504 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036304
GTTTGATTTGGTGTTCAGTGGTGTAGATGGTGTTTGACAGTCAGCGAACAGTCATGCGTTTTCAGTCAAAAATACAGCGTTTACAGCACGATATGGATTACAATATTCTGGAGAGAATGATTACAAGAGATTCACCAGAGTTCAGGAGCCGCGGTCGCGCTGGAGGAGCGTCCGAACAGAGAGCTTCATCTGCGGCCGTCGTGGAGAACCAGACAGCAGaGATGCAAAGACGAGGACGGAGGAAGACGGGCGTTCTTTCATTCTTCCGGAAAATGGGAAGAGCTATCCATAAGCTTTGCTGTATGGATGCAGCAGCAACATCTATAGTGGACCACACTGACCCATCTGGTAGCGCTCGTGCTGTCGAATCGAGAGAACGGACTAGAAAGATCTACCTCAAGAAAGATTGCAGCAAAGTCATCTTGAGAATCGTCAAGGGCACCCCAGGGTCCCCGGATCCGTGTGGGGTCTGTGTTGTCTCCATTGACGTGGACCAACCTGGGATCTCCAGTGTGTCTGTTGACCCGGGACCTAATGGATTCTACTCGGATTCATTTAGTCCGGGTCCACCTGGAGTCCTCCGCTTGTCCCTCGTCCTATGTCCATCTGGGGTGTTCAGTGTGTCTCTTAACGCTCGTCCATCTCGAGGCTGCAGGGTGTCTGTTGATCCCGGTTCGTCTGGGTTCTTCAGTGTGTCCTCTTATCCGGGTGCGTCTCGGGACTTCAGTGTATCTGGTAACCCGGATGCCTCTGGAGGCTGCAGGCTGTCTGTGGATACGGGTCTGTTTGGGGGCTGCGCAGTGTCTGCTGCTCCGGGTCCGTCTGATTGCGGCATGTCAGCTGCTCCGGGTCCGTCTGATTGCGGCATGTCTGCTGCTCCGGGTCCGTCTGATTGCAGCATGGCTGCTGATCCGGGTCCGTCTGATTGCAGCATGGCTGCTGATCCGGGTCCGTCTGAT
>TCONS_00036303
GTTTGATTTGGTGTTCAGTGGTGTAGATGGTGTTTGACAGTCAGCGAACAGTCATGCGTTTTCAGTCAAAAATACAGCGTTTACAGCACGATATGGATTACAATATTCTGGAGAGAATGATTACAAGAGATTCACCAGAGTTCAGGAGCCGCGGTCGCGCTGGAGGAGCGTCCGAACAGAGAGCTTCATCTGCGGCCGTCGTGGAGAACCAGACAGCAGaGATGCAAAGACGAGGACGGAGGAAGACGGGCGTTCTTTCATTCTTCCGGAAAATGGGAAGAGCTATCCATAAGCTTTGCTGTATGGATGCAGCAGCAACATCTATAGTGGACCACACTGACCCATCTGGTAGCGCTCGTGCTGTCGCCTCAGAATCGAGAGAACGGACTAGAAAGATCTACCTCAAGAAAGATTGCAGCAAAGTCATCTTGAGAATCGTCAAGGGCACCCCAGGGTCCCCGGATCCGTGTGGGGTCTGTGTTGTCTCCATTGACGTGGACCAACCTGGGATCTCCAGTGTGTCTGTTGACCCGGGACCTAATGGATTCTACTCGGATTCATTTAGTCCGGGTCCACCTGGAGTCCTCCGCTTGTCCCTCGTCCTATGTCCATCTGGGGTGTTCAGTGTGTCTCTTAACGCTCGTCCATCTCGAGGCTGCAGGGTGTCTGTTGATCCCGGTTCGTCTGGGTTCTTCAGTGTGTCCTCTTATCCGGGTGCGTCTCGGGACTTCAGTGTATCTGGTAACCCGGATGCCTCTGGAGGCTGCAGGCTGTCTGTGGATACGGGTCTGTTTGGGGGCTGCGCAGTGTCTGCTGCTCCGGGTCCGTCTGATTGCGGCATGTCAGCTGCTCCGGGTCCGTCTGATTGCGGCATGTCTGCTGCTCCGGGTCCGTCTGATTGCAGCATGGCTGCTGATCCGGGTCCGTCTGATTGCAGCATGGCTGCTGATCCGGGTCCGTCTGAT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095671

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036304 False 959 mRNA 0.54 3 52639377 52642504
TCONS_00036303 True 965 mRNA 0.54 3 52639377 52642504

Neighbor

gene id symbol gene type direction distance location
XLOC_018484 si:ch211-221n20.1 coding downstream 7379 52628875 ~ 52631998 (-)
XLOC_018483 si:ch211-221n20.7 coding downstream 23044 52613021 ~ 52616333 (-)
XLOC_018482 si:dkey-235d18.6 coding downstream 36283 52599959 ~ 52603094 (-)
XLOC_018481 NA coding downstream 94623 52541466 ~ 52544754 (-)
XLOC_018480 si:ch1073-287p18.1 coding downstream 300567 52332972 ~ 52338810 (-)
XLOC_018486 NA coding upstream 10996 52653500 ~ 52654969 (-)
XLOC_018487 si:ch211-221n20.4 coding upstream 20527 52663031 ~ 52666150 (-)
XLOC_018488 NA coding upstream 30604 52673108 ~ 52676467 (-)
XLOC_018489 BX005301.1 coding upstream 43725 52686229 ~ 52691004 (-)
XLOC_018490 si:ch211-221n20.7 coding upstream 59508 52702012 ~ 52705325 (-)
XLOC_017928 CU539064.1 misc downstream 42585676 10053405 ~ 10053701 (-)
XLOC_018476 CU905509.1 non-coding downstream 495072 52144191 ~ 52144305 (-)
XLOC_018474 NA non-coding downstream 725104 51910775 ~ 51914273 (-)
XLOC_018472 BX936461.1 non-coding downstream 890209 51748497 ~ 51749168 (-)
XLOC_018467 NA non-coding downstream 997029 51619897 ~ 51642348 (-)
XLOC_018491 NA non-coding upstream 176303 52818807 ~ 52819616 (-)
XLOC_018493 CABZ01076171.1 non-coding upstream 184506 52827010 ~ 52827126 (-)

Expression


Co-expression Network