XLOC_018491


Basic Information

Item Value
gene id XLOC_018491
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 52818807 ~ 52819616 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00037011
gtaggtcttctgcagtattggtgatgattaatgcagatcagcagatgattcagcagagaaatccaccttcaacacttccaaatcatcaactagaagacaagttattGATCCACCACAAGAAGACAagtcagCGCCCTGTTCAGTGGGCGGAGCTTAAAGGGAAACACCCTTGATCACATGACAGTGGAGCACCAATGAGAAACACAAAACACACTCTCAATCACATTATTGCTGTCACTCAACTTCAGCATCAGCCGATAAGGATCATCTCTGTGATTGGACAGGAATGGTGGTGGGCGTGGCACTCAGTGGGCACTCTTTTGTCATTGGCTGAAAGTCTTTTGATGAATACTGGTGACATTAAACAGCAAGTCTCATCTGTTAACAATAGTTTCTGCGTTCAGACGCGTGAAATAACAGTGAGAAATATAGTCGTCATAacaattgttaataaaaaattctcagtATAACTAATGTTAAAGTATATTGATTAATAAATGTAGTCAAAAAGCTAATCTTAGTGTTAACTTACTAATAAAAAAGTGtgtttatttttgaatgaatgaaatcttgtTGTAAAGCGTCACACTTTCAAGTAATGTTTATAATAAAGTGCCACTAGTTAACACTAATGCTTTAATAACTCTGGTTTAAAGTACTGATGATGTGTTGGTGCCAGTGgagtagtg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00037011 True 689 lncRNA 0.38 2 52818807 52819616

Neighbor

gene id symbol gene type direction distance location
XLOC_018490 si:ch211-221n20.7 coding downstream 113482 52702012 ~ 52705325 (-)
XLOC_018489 BX005301.1 coding downstream 127803 52686229 ~ 52691004 (-)
XLOC_018488 NA coding downstream 142340 52673108 ~ 52676467 (-)
XLOC_018487 si:ch211-221n20.4 coding downstream 152657 52663031 ~ 52666150 (-)
XLOC_018486 NA coding downstream 163838 52653500 ~ 52654969 (-)
XLOC_018492 tbc1d7 coding upstream 5599 52825215 ~ 52846212 (-)
XLOC_018493 CABZ01076171.1 coding upstream 7394 52827010 ~ 52827126 (-)
XLOC_018494 dspb coding upstream 32177 52851793 ~ 52882881 (-)
XLOC_018495 ctsbb coding upstream 67311 52886927 ~ 52902720 (-)
XLOC_018496 fdft1 coding upstream 87781 52907397 ~ 52939501 (-)
XLOC_017928 CU539064.1 misc downstream 42765106 10053405 ~ 10053701 (-)
XLOC_018481 NA non-coding downstream 274053 52541466 ~ 52544754 (-)
XLOC_018476 CU905509.1 non-coding downstream 674502 52144191 ~ 52144305 (-)
XLOC_018498 NA non-coding upstream 154244 52973860 ~ 52995339 (-)
XLOC_018501 NA non-coding upstream 468257 53287873 ~ 53292515 (-)
XLOC_018505 NA non-coding upstream 984746 53804362 ~ 53810669 (-)
XLOC_018510 NA non-coding upstream 1226562 54046178 ~ 54046733 (-)

Expression


Co-expression Network