XLOC_018501


Basic Information

Item Value
gene id XLOC_018501
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 53287873 ~ 53292515 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036522
TGCAGGTGACGCTGCTGTGTTAATAATAGTCATATATCGGTCAAATATCCgctgctcgctctctctctctctctctctctctctctctctctctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgttaacagtgGTGTTTACAAGTGGAAAATCATATGAGtggGTTTGTTGCTAAGATGACTGGACACGGATGGTTCGCGTGGGCGTGCatgaataaaatctgaaaatccTCCATAGTCTGTCCTTCACAGAGCAAACACAGGTCCAGCCACCAAAAAAACTGAACATCCAGAGCCACACTTAAAATCATCCCGGAAGTGCCGGCGAAAGGGACGCTTGTAAATGTCTGCGTTGCCGATTGTGACCATGAGCTCTCTACATTTCTAACCGAGCGTGAACTGGAGCTTCACCGATGATGTCACTTTAAACGAGCGCCATAAAACTTTTAAGGAACATCTGCTTCAGTTTAGATGAGCGCGACGGAGAGCCCCGGCTCTGTGACGTCA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036522 True 509 lncRNA 0.48 2 53287873 53292515

Neighbor

gene id symbol gene type direction distance location
XLOC_018500 CABZ01115113.1 coding downstream 111198 53169969 ~ 53176675 (-)
XLOC_018499 CABZ01066813.1 coding downstream 209266 53069721 ~ 53078607 (-)
XLOC_018498 NA coding downstream 292534 52973860 ~ 52995339 (-)
XLOC_018497 gata4 coding downstream 319995 52952116 ~ 52967878 (-)
XLOC_018496 fdft1 coding downstream 348372 52907397 ~ 52939501 (-)
XLOC_018502 wasf1 coding upstream 8073 53300588 ~ 53366137 (-)
XLOC_018503 mettl24 coding upstream 115769 53408284 ~ 53435483 (-)
XLOC_018504 slc25a29 coding upstream 308123 53600638 ~ 53624664 (-)
XLOC_018505 NA coding upstream 511847 53804362 ~ 53810669 (-)
XLOC_018506 ppp2r5cb coding upstream 605678 53898193 ~ 53963515 (-)
XLOC_017928 CU539064.1 misc downstream 43234172 10053405 ~ 10053701 (-)
XLOC_018493 CABZ01076171.1 non-coding downstream 460747 52827010 ~ 52827126 (-)
XLOC_018491 NA non-coding downstream 468257 52818807 ~ 52819616 (-)
XLOC_018489 BX005301.1 non-coding downstream 596869 52686229 ~ 52691004 (-)
XLOC_018488 NA non-coding downstream 611406 52673108 ~ 52676467 (-)
XLOC_018510 NA non-coding upstream 753663 54046178 ~ 54046733 (-)
XLOC_018511 NA non-coding upstream 757917 54050432 ~ 54051494 (-)
XLOC_018513 NA non-coding upstream 856682 54149197 ~ 54154203 (-)
XLOC_018514 NA non-coding upstream 872370 54164885 ~ 54173299 (-)

Expression


Co-expression Network