XLOC_018511


Basic Information

Item Value
gene id XLOC_018511
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 54050432 ~ 54051494 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00037015
atggatggatagacagacaagatgCATATACAGAGGGATGGATATATGGACATACCGATGGAAGgctacatggatggatggacagacgaatAGACATATGGAGGGATGGACagacagactggTAGACAGATACATGTACGGATGAAAGGATAGATATATtcatgaatagatggatgggcagatggaaCTGTaggttgtaaataatgtgatttctCTTCATAAGGGCTCCTCAGTGTTTGATCAGGAGGGATTGATGTTGAACTGTTATTATGCGTTTAATTTCATCTGGAAAACTGGtgaccattgacttacattataaTAATCTCCATGGATCCCAAactcagctaaaaatcttctttaaagttCTGCTGAATTAAAAAGAGCATCAGCAATGACTTGAAGGCGAGTAAACGAACTGTAAATTTTcgtttttgcgtgaactatccctttaattgtgaAGAAAACCCGAGCATTGCTGCATTTGTTTCCCTCTGGGTTGATTTAACGGTGAAATCTGCTCTGGATGTGAGTGTGAACAGTGATCTGAATGCGTCCGGTTTTTGGCTATACGACCGTCCCGCTGGGAGAGTTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00037015 True 592 lncRNA 0.41 3 54050432 54051494

Neighbor

gene id symbol gene type direction distance location
XLOC_018510 NA coding downstream 3699 54046178 ~ 54046733 (-)
XLOC_018509 si:dkey-241l7.6 coding downstream 15889 54013212 ~ 54034543 (-)
XLOC_018508 hsp90aa1.1 coding downstream 38389 53982317 ~ 54012043 (-)
XLOC_018507 hsp90aa1.2 coding downstream 68806 53967350 ~ 53981626 (-)
XLOC_018506 ppp2r5cb coding downstream 86917 53898193 ~ 53963515 (-)
XLOC_018512 mgat2 coding upstream 15547 54067041 ~ 54075136 (-)
XLOC_018513 NA coding upstream 97703 54149197 ~ 54154203 (-)
XLOC_018514 NA coding upstream 113391 54164885 ~ 54173299 (-)
XLOC_018515 CABZ01111496.1 coding upstream 123484 54174978 ~ 54192130 (-)
XLOC_018516 arf6a coding upstream 145049 54196543 ~ 54198130 (-)
XLOC_017928 CU539064.1 misc downstream 43996731 10053405 ~ 10053701 (-)
XLOC_018505 NA non-coding downstream 239763 53804362 ~ 53810669 (-)
XLOC_018501 NA non-coding downstream 757917 53287873 ~ 53292515 (-)
XLOC_018498 NA non-coding downstream 1055093 52973860 ~ 52995339 (-)
XLOC_018493 CABZ01076171.1 non-coding downstream 1223306 52827010 ~ 52827126 (-)
XLOC_018520 NA non-coding upstream 219397 54270891 ~ 54271455 (-)
XLOC_018521 NA non-coding upstream 288217 54339711 ~ 54345412 (-)
XLOC_018525 NA non-coding upstream 432271 54483765 ~ 54488224 (-)

Expression


Co-expression Network