XLOC_001883 (si:ch211-57m13.10)


Basic Information

Item Value
gene id XLOC_001883
gene name si:ch211-57m13.10
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 6747720 ~ 6753115 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003721
GAAATTCCTCAGAGTGACAAACGAACGAGTACAGTGAACAGTGATTATCGACTTTAGCGACTTGTTTTGCATCTCAAATGGCAAATAACACGTCAGCTGTGTTTTTTACTCGACTTAATTTGATAAAGCCTGTATTTGTCAACGATAATCATCAAAGTGACATGATGGCTTCTCCTACACCTCCTACAGTGATGAGAAGCCCAACAGaAAATCTAGAGAGAAGGAGGAAAGGGAATAAAGCCTCTGCTTTCTTTAAGAGAGCATGGAAGGCTGTGAAGCGCCCTTTCCTTTGCTGTGAACGGAACAGAGTGGCTCCATTTGAACCACAGTCAGATGTCGACGATTTTGAGCATCTGCCTGTTCCAGGTCCCTCCAGGACCGTCGCAGCACATGCAGACCTTGAGCCGGTGTGGCTGCCAGGCCAGGTCTGTGAAGACCCTCAGCCgttgagtgttccgggcccctCCAGGATCAAGCAAACAGCAGATCCGGCCCGTCCAGAGTCCTCAACGGCCCTGACAGGTCATGTTGACACTGAGCTGGTGTGTCTGCCAGGCCAGATCTGGGAAGATCCTCAGCCAATCATTGTCCATGGCCTCACCAATATTAAGAACATGACGGATGCAGATTCGGCCTGTCCTGAGTCGCCTCCGTCTGTTCAAGACCCCTCTGATATTGATGGGACTGATGaaaaacccaagaaaggaaggaaagggaAAAGAGTCTCTGCTTTCTTCAAGAGAGTATGGAAGGCTGCAACGTGCCCTTTCCTGTGCTGTGACACAGATGTAGTCCAGCATCTTACACCACAACCTGAACCTGAACCTGAGCCAGAGCCAGAGTCAGAGTCAGAGCCAGAGCTGGAGGAAGCTAACCCTGAGTCAGTATGTCTGCCAGGCCAGGTTCCTGAGGAGCCTAAAGAGGCTTCTGGACCCCCTCGTGGATTTGATTTGTCTGACTTTGAAGTAGGAGCCGTGATTGGAGAAGGAGCTTTTGGCCAGGTGTTTGTGGCATCTCACAAACTTCGGAAAAGTGAAAAGGTTGCCCTGAAGTTTATCAACAAGAAGGAAGACAACCATTATCTCGACATTGATGGTCATTCCACACCTGTGCTTGCGGAAGTGGCAATGATGCTCAAGTTGAAGAATGCTCCGCAATGCCCAAACATCATCGGATTACACGACTGGATTGAGAATGAGAACAACTTCATTCTCAGTCTGGAGTACGCAGAGTCATACCAGACCTTGGATCAGTACATCACAGATACATTGGACATTGGTGAAAACCGATCACGCCAGTTAATGAGTCAGTTGATCCAAGCTGTCAAGTTCTGCACTGAGCGTGGAGTTTTCCATGGAGATATCCACACGGAGAACATCATGGTGACTCAACCCCGATTACAGCTCAAATTGATCGACTTTGGTTGTGCTTGGCCAATTAGCAGCGAGCCTTTCAATAGCGATCAATATCGAGGAGTTATTTACTGCACGCCACCTGAGGTTTTCAGGGATCCCACATACCTTGCTGACCCGGTAAACGTCTGGACAATTGGCATCGTGCTGTATGAAATCTTGCATGCAGAATTGCCCTTTCGTGACGAAGATTCAGTAATGTTTGAATCCGCTGAGATACACCCCAGGTTATCTCCAGCATGCCAGGACCTGATTTCCCAGTGTTTCATCCGCTGTCCACTTGAGCGGCTGAAGTTACATCAGTTAGAAGAGCACCAGTGGTTCAATCTAACAACCCCAAATCTAATGGAGCTGTTAGACGCCAGGATaaaacaCTAAAGAAGCGAAGAGGAGAACAGCAGCATTTCCAgaatttcacaagactgttaaagttattaattactccctcatgtcattccaaacccctcaGATCTTACTTTTCAGTGTCAGTGTGTTGATGAGAGCTCTGTCCTGCACTGTGTGTGTTTCGCACTGCTGACGTTTACCTcagatgtgcccacgctttgtttaaatgagaggaagtcgcgcaggcctctgggttatccgtcagcagtgcgacacacatCCAGTGCAGTACAGGACTTctgaagtcattatttttgttttaatattttagtttttctttcttcATTAAAGAAGTTTCACTTCAAACCCCTGACACCTTTCCtcatcttcagaaaacaaatgaaaagattTGAGATGAAATCAAATCATCAAACCATGAGAGCTCTGtcctgcactgtgtgtgtgttcactgctgACATTTACCTcagatgtgcccacgctttgtttaaatgagaggaagtcgcgcaggcctctgggttaaacgtcagcagtgcgacacacatacagtgcactgCGCTCTTCTGGACGTGCGGtttgagggtcagagagctctcagatttcatctcaaatgttttaatttgggTTCTCATTATGAACTAAACATGAATTTGAACTAAGGACATGAgctgagtaattaatgacaataatggtAATGAATGGTGCCtagaccgcagctctgcacaagacctttggccacaggagaaatggtcgtacccaaccgagcctggtttctctcgaggttttttccttcacttttgtcaattggtgaagttttgttcctcgccactgtcgccgctggcttgcttggttgggacttgtggagctgcgcatcgatggatttgctcttcagtgtttggactttcagcagtgacaattaaaccacactgaactgaactgaactgaacttcaactccaGTGCTGTCACAGTTTTCTCCTCTAAAGTGTCATCAAAGATCTGCTCGACTATTTTCTCCCTCATTAATGAATCTGGTGTTCTGTCATAAGAGAGACTGATTGTTTTATAATGAAGTGTTCATGATTGTTTTGTAATGAATTGTTCTTTGAATTGTTTTGTGATGAACTGCTTTTATGTATTGTTGGCtaataagtcaaataaaatcCTGTGAATCAAACTGAAGCTCTGATCATCATTTCTGTGAGTTTTCTAAATGACTCCTTACTCAATTAAAGAGAGAGTTCTCCCTCAACTATTTACTCACGTGCTTCCAAACCGATGaggttctttcctctgttgaacactgaagaagatacaaatctgaaaacctgtaaccattaatgtccacagtaggaaaacaaacacaatggaagtcaatagttacaggtttccagcatttttcaaaacatcttcttttgtgtataacAGAAGAAA

Function

symbol description
si:ch211-57m13.10 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095902

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003721 True 3207 mRNA 0.45 9 6747720 6753115

Neighbor

gene id symbol gene type direction distance location
XLOC_001882 si:ch211-57m13.9 coding upstream 12923 6729670 ~ 6734797 (+)
XLOC_001881 si:ch211-57m13.8 coding upstream 44908 6697369 ~ 6702812 (+)
XLOC_001880 si:ch211-57m13.7 coding upstream 60745 6681523 ~ 6686975 (+)
XLOC_001879 si:ch211-57m13.6 coding upstream 77437 6664911 ~ 6670283 (+)
XLOC_001878 si:ch211-57m13.5 coding upstream 101036 6641514 ~ 6646684 (+)
XLOC_001884 NA coding downstream 1155 6754270 ~ 6755766 (+)
XLOC_001885 ddx4 coding downstream 131008 6884123 ~ 6905574 (+)
XLOC_001886 slc38a9 coding downstream 154600 6907715 ~ 6944407 (+)
XLOC_001887 psd3l coding downstream 276549 7029664 ~ 7233955 (+)
XLOC_001888 fut10 coding downstream 502580 7255695 ~ 7264766 (+)
XLOC_001871 NA non-coding upstream 630784 6116294 ~ 6116936 (+)
XLOC_001868 NA non-coding upstream 866487 5880700 ~ 5881233 (+)
XLOC_001867 NA non-coding upstream 954194 5788407 ~ 5793526 (+)
XLOC_001864 NA non-coding upstream 1159490 5587960 ~ 5588230 (+)
XLOC_001863 NA non-coding upstream 1204579 5527190 ~ 5543141 (+)
XLOC_001890 BX537303.1 non-coding downstream 820201 7573316 ~ 7578051 (+)
XLOC_001897 NA non-coding downstream 1055596 7808711 ~ 7809243 (+)
XLOC_001898 NA non-coding downstream 1090291 7843406 ~ 7849873 (+)
XLOC_001899 NA non-coding downstream 1117494 7870609 ~ 7901888 (+)

Expression


Co-expression Network