XLOC_001890 (BX537303.1)


Basic Information

Item Value
gene id XLOC_001890
gene name BX537303.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 7573316 ~ 7578051 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003739
ACTTAGATCATGCCGTACACATTCAACTGCCGTTCTACATGATGggTGTGTGTTAATTTTAGAGGGATATGGAGAGAAGACAGCATGAGGAAACAGCAGAGGGCTCCAGATCACACCAGTCAACAGTAACAGGAACCCTTGCACTAAAGAACTTCACCATACCCAGGAAGAAACGCACCTCCGGAGAAGTACTTTTGGAATGTTGTTCAGAAGAGAGCCGCGATTACAGTCTCATTCAAACAAAACTCAAAGACTTCAAGCTGGACACAAGAAAGGATCAGGCAAATGCATGGGTTTGGAAAGAAATCTGTTTAGTGCACAATGAGGAGCTCCTTAAAAAGTTCTCTGAAAAAAGGGCAGAGATGCGTGCTAAAGGAAGACATGGGAgagaaatggaggaaagattCTGCTTTTTAGCGGCAACAGATCAAATGACGACCCAGATTTATCAGCATGGTCTGCCGGTTGGCAGCACAACACAGCATGCCTTGGGAAAGCCATCTTATGGAGTATATCTGTTCAAGCACGTTGATGTGGCATTGAAATCAGCCTGCACGAGTGCTAAAAAGCTGTTC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000102985

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003739 True 575 processed_transcript 0.45 4 7573316 7578051

Neighbor

gene id symbol gene type direction distance location
XLOC_001889 purg coding upstream 8242 7563755 ~ 7565074 (+)
XLOC_001888 fut10 coding upstream 308550 7255695 ~ 7264766 (+)
XLOC_001887 psd3l coding upstream 339361 7029664 ~ 7233955 (+)
XLOC_001886 slc38a9 coding upstream 628909 6907715 ~ 6944407 (+)
XLOC_001885 ddx4 coding upstream 667742 6884123 ~ 6905574 (+)
XLOC_001891 tex15 coding downstream 7877 7585928 ~ 7588878 (+)
XLOC_001892 ppp2cb coding downstream 15134 7593185 ~ 7617748 (+)
XLOC_001893 hint1 coding downstream 58760 7636811 ~ 7640797 (+)
XLOC_001894 fam136a coding downstream 93209 7671260 ~ 7672949 (+)
XLOC_001895 ggcx coding downstream 125200 7703251 ~ 7723457 (+)
XLOC_001884 NA non-coding upstream 817550 6754270 ~ 6755766 (+)
XLOC_001871 NA non-coding upstream 1456380 6116294 ~ 6116936 (+)
XLOC_001868 NA non-coding upstream 1692083 5880700 ~ 5881233 (+)
XLOC_001867 NA non-coding upstream 1779790 5788407 ~ 5793526 (+)
XLOC_001864 NA non-coding upstream 1985086 5587960 ~ 5588230 (+)
XLOC_001897 NA non-coding downstream 230660 7808711 ~ 7809243 (+)
XLOC_001898 NA non-coding downstream 265355 7843406 ~ 7849873 (+)
XLOC_001899 NA non-coding downstream 292558 7870609 ~ 7901888 (+)
XLOC_001900 NA non-coding downstream 400466 7978517 ~ 7984582 (+)
XLOC_001901 NA non-coding downstream 409974 7988025 ~ 7992459 (+)

Expression


Co-expression Network