XLOC_019041



Basic Information


Item Value
gene id XLOC_019041
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 32045424 ~ 32070143 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00039428
CTTTAGAAAGCTTAGTTCTAAACAAAACTCTGAGTGAATGTAAAAATATTTCCTCAAAGACTCTTAACATGAGAAGAGTGATAAGAGTCATTGTTTCCATGTTATTCTAAGATTTTCCTAAACAGacatgacttcaaaccacacaaTGAACTTCAGACGattctgttttgtctttttttctgccACACCTTGACTGGAATGACATCAAGTGAACTTACAATGATAATCTTAAATATTCAGTACATGCTTTAATTGTTTGACATATAGGTTTGCGTGATCTTCCTCTAATTCTACCAACAATGGCAATGGATAATTTCGCACAGATCTTAAAAATAAGTTGAGGTGAAAGTTAAGTGCTGAACTGTGATGGGAACAAACCAGACCAAAGATAGTATCAATATAGGACATATGCTTTCTgatattcaataattcagtatattgtgataattaacatgcacaatattgatatcattcactcattcattttctttttagctcagtccctttattaatccggggtcgccacagcggaatcaaccaccaacctatccagcacgttttttacgc

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00039428 True 567 lncRNA 0.34 2 32045424 32070143

Neighbor


gene id symbol gene type direction distance location
XLOC_019040 CABZ01006935.1 coding upstream 14672 32030636 ~ 32030752 (+)
XLOC_019038 TENM2 coding upstream 36581 31434251 ~ 32008843 (+)
XLOC_019039 NA coding upstream 308026 31735189 ~ 31737398 (+)
XLOC_019037 asl coding upstream 768088 31253048 ~ 31277336 (+)
XLOC_019036 st6gal1 coding upstream 861389 31150438 ~ 31184035 (+)
XLOC_019042 NA coding downstream 7914 32078057 ~ 32099320 (+)
XLOC_019043 si:ch211-247j9.1 coding downstream 262473 32332616 ~ 32349711 (+)
XLOC_019044 NA coding downstream 336620 32406763 ~ 32411647 (+)
XLOC_019045 CR735104.1 coding downstream 394425 32464568 ~ 32527344 (+)
XLOC_019046 NA coding downstream 685271 32755414 ~ 32757958 (+)
XLOC_019021 NA non-coding upstream 1859103 30184309 ~ 30186321 (+)
XLOC_019020 NA non-coding upstream 1861870 30163899 ~ 30183554 (+)
XLOC_019017 NA non-coding upstream 2017795 30022933 ~ 30027629 (+)
XLOC_019048 NA non-coding downstream 957758 33027901 ~ 33029631 (+)

Expression



Co-expression Network