XLOC_001909 (BX682234.1)


Basic Information

Item Value
gene id XLOC_001909
gene name BX682234.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 8481660 ~ 8484001 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003763
ATTTACTGTTTCATAAGTGTGAACAATATTAGCAATAAGCAATGCTTGTTTATTAGAAAAGCTAGATTAAGGAACCAGCTAGAGCAAAGGAGACATGCcgacaattctttttttttttcttgttctgaGTGGTTAAGTGCTTGCGGAAAGTGTTTGTGAACGTTTTTTTAGAAGTGAAAGCTTGAAGGAACTGAAAAGAAGAGCAGTGCAGCCTAAAACCACCATTTACTCAACATCACAATGACCAAGTCAGAGATACCCGAGGctatttatcaaaatattaataCTAAAGATACTGAAGGATGTGTAGATCTGAAGACACATAGAGAAAAACACCAGCCACCTCAACTCACAGGAAGCGTCTCAAGAAGGAACAGAAAGCAGAGAGCAGTGGAAGAGTGTTTGGGTTTGTTGTGTGCTCTTCTGCTGACGGCTGTAATAgtgatctgtgtgtgttttagcaTCCAGAGAAAACACTTACTAACACACATCACTAAACTTAATGAAGAACAAGAGCAGCTGCTGAATGACAACAAGGTTCTGACTGAAGAAAGAGAGCAGTTACTGAAATACAACAATGACCTGTCTGAAGAAAGAGAGCAGATCTTTACTAATATCACTAACCTCAAAGGAGAAAGAGAGCGGTTACTGAACCACAACAATGACCTGACTAAAGAAAGAGACCAGTTACGGAATGACAAGTGGAAAATGTGGCCATATGAACAAGATCTGCCTGCTGATAAGTTTAGATGGATTTGCTACAACaacagtttgtattttatttcatctgAGATGAAGAGCTGGAGTGACAGCAGACAAGACTGTCAGCAGAGACGAGCAGATCTGGCCATCATAAAGAGCCCAGAGGAGAAAACGTTTTTCCAGAAAGTTGTTGACAGGAATTTCTGGATTGGTCTGACAAAGACAGATGTGTGGAAATGGCTTGATGGCACTGTATTGACTAATGGGTCCAAGACTGACAGCTCTAACTGTGCTGTAGTGGCTGCAGGAGGCTATTATACCTCAGCCTGTAATTCCAACAATGGATGGATCTGCGAGAAGACTCATTATTATTAATCAGTCATTACtggaataaaaaatacagtaaacctACTGAATGAAGGATTTTTGACAGCATTACTTTTTGaaaccttatttttttcttttcttgtaataatgttttgttaCTCTGTATGGTTTTGGATAATTCTGCATCAATTCTGTAAAAAAATCTCATATTGATTTTGCTATACAATTTCCATTTTCCTGAAAGCTAAAGTGCAAAATGTAATGTATGTATACTGCGTTTGCTGTGTGCTGTTGCTGTATGTAGTGTTGGGTGTTCCCTGTTTGCATGCCTGTATCTCAACAAGATCCCATATATCTCAAAATTCTTTTAAATTTTAGTTCTTAAACTTTCCGTTTGgtatctttatttttatggtaCTGTATGGTTCATTAACAGAGATATTCAGATTTCCATCTAATTCTATTATTTTAGCAGAAGAACAAACCATGTTGAAATGTCTGTTTTTACTATCAAAACAGCAACATTGAGGACACCTGCAGTGActgtaatattttaacaaaaatgtttacaTGCCTTGAATTTTGTAAGAGttaaatatattatgatattattTTAGATTGTCATTATTGGTAAcctttttattcttaataaattaTACCATCag

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000074732

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003763 True 1694 mRNA 0.36 5 8481660 8484001

Neighbor

gene id symbol gene type direction distance location
XLOC_001908 pptc7b coding upstream 12711 8437930 ~ 8468949 (+)
XLOC_001907 hvcn1 coding upstream 68696 8401929 ~ 8412964 (+)
XLOC_001906 CU682363.1 coding upstream 138355 8343188 ~ 8343305 (+)
XLOC_001905 mtrex coding upstream 215566 8197827 ~ 8266094 (+)
XLOC_001904 pstpip2 coding upstream 339447 8101729 ~ 8142213 (+)
XLOC_001910 si:ch211-193e13.5 coding downstream 43195 8527196 ~ 8530065 (+)
XLOC_001911 tbc1d10ab coding downstream 50749 8534750 ~ 8576218 (+)
XLOC_001912 aplnrb coding downstream 145274 8629275 ~ 8631361 (+)
XLOC_001913 NA coding downstream 162958 8646959 ~ 8650855 (+)
XLOC_001914 pmaip1 coding downstream 172416 8656417 ~ 8657684 (+)
XLOC_001902 NA non-coding upstream 443771 8036184 ~ 8037889 (+)
XLOC_001901 NA non-coding upstream 489201 7988025 ~ 7992459 (+)
XLOC_001900 NA non-coding upstream 497078 7978517 ~ 7984582 (+)
XLOC_001899 NA non-coding upstream 579772 7870609 ~ 7901888 (+)
XLOC_001917 NA non-coding downstream 225484 8709485 ~ 8715748 (+)
XLOC_001919 NA non-coding downstream 289435 8773436 ~ 8773659 (+)
XLOC_001921 BX571955.2 non-coding downstream 378520 8862521 ~ 8868895 (+)
XLOC_001926 NA non-coding downstream 638392 9122393 ~ 9125863 (+)

Expression


Co-expression Network