XLOC_001921 (BX571955.2)


Basic Information

Item Value
gene id XLOC_001921
gene name BX571955.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 8862521 ~ 8868895 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003778
GGTGTGACTCCCCACCTACATTCCTATTTTTCCGATTTCTTAAATCATGGACACTGTCATTATCCTTTTACTGAAggagcttttttgttttttttctgtcttgttttttgCAGAGAATACTTGGAGCCAAACTGGATCCAAAGATGCGTTTCTTTGGACGCTCTTTAGATAGTCGTGAAGACATGAACAGAGACTCCATCCCTGATATTTCAGTCGGAGGTGAAGGGAAGGTAGTGCAGCTCTGGTCAAGAGGAATTGCATCAGTCTCAACAAGAGTCTCCTTCAACCCAGAAAAGGTCAGCATTGTGAATAAAACTTGTCTGTTTGGAGGAAAAATGGTGCCGTGTGTCACTGCCAAAGTTTGCTTCAGGTCCACATTTAGACCCACAGGTTTGGGTAAAGTAGATATCAAGTACAGCCTGATGCTGGATGCCGACCTGCAGTCATCGAGAGTCACTTCAAGAGCACAGTTTGAAAACAAAGACCGAACTATTCAGAAAGAAATCAGCATCTTTGACAAAGAGACTTGTGTGGATCATATTTTTTATGTGCAGGAGACTCCTGATTTCATCAGTCCAGTTGGTTTGCGTGTCAACATCAGTTCACAAGATTCAGACAACGGTCCAGTCCTGGATGCATTTTTGCCCACAGCATGGGAATTTTTTGTCCCTTTTGTGAAGGATTGTGGCCCTGATGATAAATGTACTTGTGACCTGAAGCTGACTGTGAAAGCTGTTAATGTGCCAAGCTCGTCTTCACTTCTAGTCGGCCCTGACAGAAGAAGACTCCCCATCATGGTAACAGTAACCAACACAAAGGAAAATGCGT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095015

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003778 True 828 processed_transcript 0.43 6 8862521 8868895

Neighbor

gene id symbol gene type direction distance location
XLOC_001920 itga2.1 coding upstream 4316 8847033 ~ 8858205 (+)
XLOC_001918 itga1 coding upstream 21483 8730988 ~ 8841038 (+)
XLOC_001919 NA coding upstream 88862 8773436 ~ 8773659 (+)
XLOC_001917 NA coding upstream 146773 8709485 ~ 8715748 (+)
XLOC_001916 si:dkey-27b3.4 coding upstream 164734 8688678 ~ 8697787 (+)
XLOC_001922 itga2.3 coding downstream 573 8869468 ~ 8884205 (+)
XLOC_001923 itga2.2 coding downstream 16874 8885769 ~ 8940896 (+)
XLOC_001924 fstb coding downstream 99308 8968203 ~ 8976823 (+)
XLOC_001925 snx18b coding downstream 223920 9092815 ~ 9097996 (+)
XLOC_001926 NA coding downstream 253498 9122393 ~ 9125863 (+)
XLOC_001913 NA non-coding upstream 211666 8646959 ~ 8650855 (+)
XLOC_001906 CU682363.1 non-coding upstream 519216 8343188 ~ 8343305 (+)
XLOC_001902 NA non-coding upstream 824632 8036184 ~ 8037889 (+)
XLOC_001937 CABZ01061749.1 non-coding downstream 856879 9725774 ~ 9725891 (+)
XLOC_001938 NA non-coding downstream 954302 9823197 ~ 9835446 (+)
XLOC_001939 NA non-coding downstream 1021796 9890691 ~ 9895543 (+)
XLOC_001940 BX248503.1 non-coding downstream 1044168 9913063 ~ 9913177 (+)

Expression


Co-expression Network