XLOC_001940 (BX248503.1)


Basic Information

Item Value
gene id XLOC_001940
gene name BX248503.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 9913063 ~ 9913177 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003803
tttaattttcctagctctctgcaactcaaaTGAatgcccactaaagctaagcagggctgtaccTGGTCAGAACCTGGacgggagaccacttgggaaagctatgttgctgccggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000109594

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003803 True 115 rRNA 0.49 1 9913063 9913177

Neighbor

gene id symbol gene type direction distance location
XLOC_001939 NA coding upstream 17520 9890691 ~ 9895543 (+)
XLOC_001938 NA coding upstream 77617 9823197 ~ 9835446 (+)
XLOC_001936 rabgap1 coding upstream 102466 9697097 ~ 9810597 (+)
XLOC_001937 CABZ01061749.1 coding upstream 187172 9725774 ~ 9725891 (+)
XLOC_001935 rc3h2 coding upstream 251167 9595575 ~ 9661896 (+)
XLOC_001941 AL935269.1 coding downstream 264924 10178101 ~ 10195602 (+)
XLOC_001942 sh2d3ca coding downstream 297278 10210455 ~ 10274162 (+)
XLOC_001943 NA coding downstream 374971 10288148 ~ 10295789 (+)
XLOC_001944 urm1 coding downstream 399847 10313024 ~ 10326025 (+)
XLOC_001945 cercam coding downstream 438508 10351685 ~ 10380131 (+)
XLOC_001926 NA non-coding upstream 787200 9122393 ~ 9125863 (+)
XLOC_001921 BX571955.2 non-coding upstream 1044168 8862521 ~ 8868895 (+)
XLOC_001954 CR931761.1 non-coding downstream 1202677 11115854 ~ 11115970 (+)
XLOC_001955 NA non-coding downstream 1346977 11260154 ~ 11312342 (+)
XLOC_001959 BX640403.1 non-coding downstream 1585516 11498693 ~ 11498809 (+)

Expression


Co-expression Network