LOC118964682


Basic Information

Item Value
gene id LOC118964682
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 1327322 ~ 1328266 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005051889.1
TGACATGAACCCACTACACATTCAGCAACTTTAGGTTGATCTCTATAGAACCACTGTAAATGACATGAACCCACTACACATTCAGCAACTTTAGGTTGATCTCTATAGAACCACTGTAAATGACATGAACCCACTACACATTCAGCAACTTTAGGTTGATCTCTATAGAACCACTGTAAATGACATGAACCCACTACACATTCAGCAACTTTAGGTTGATCTCTATAGAACCACTGTAAATGACATGAACCCACTACACATTCAGCAACTTTAGGTTGATCTCTATAGAACCACTGTAAATTACATGAACCCACTACACATTCAGCAACTTTAGGTTGATCTCTATAGAACCACTGTAAATGACATGAACCCACTACACTTTCAGCAACTTTAGGTAGATCTCTATAGAACCACTGTAAATTACATGTTTAGGTTGATCTCTATAGAACCACTGTAAATTACATGTTTAGGTTGATCTCTATAGAACCACTGTAAATTACATGTTTAGGTTGATCTTTATAGAACCACTGTAAATTACATGTTTAGGTTGATCTCTATAGAACCACTGTAAATTACATGTTTAGGTTGATCTCTATAGAACCACTGTAAATTACATGTTTAGGTTGATCTCTATAGAACCACTGTAAATTACATGTTTAGGTTGATCTCTATAGAACCACTGTAAATTACATGTTGAGGTTGATCTCTATAGAACCACTGTAAATTACATGTTGAGGTTGATCTCTATAGAACCACTGTAAATTACATGTTTAGGTTGATCTCTATAGAACCACTGTAAATTACATGTTTAGGTTGATCTCTATAGAACCACTGTAAATTACATGTTTAGGTTGAGAAACTcaaaacca

Function

NR:

description
PREDICTED: uncharacterized protein LOC106588896

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005051889.1 True 869 mRNA 0.35 2 1327322 1328266

Neighbor

gene id symbol gene type direction distance location
cyfip1 LOC106590724 coding upstream 26698 1173711 ~ 1300624 (+)
tubgcp5 tubgcp5 coding upstream 193414 1089396 ~ 1133908 (+)
slc9a7 slc9a7 coding upstream 355213 781840 ~ 1244153 (+)
nit2 nit2 coding upstream 709727 602103 ~ 617595 (+)
tbc1d23 tbc1d23 coding upstream 830194 439965 ~ 497128 (+)
gabrb3 LOC107673538 coding downstream 5831 1334097 ~ 1398380 (+)
atp10a atp10a coding downstream 131801 1460067 ~ 1596619 (+)
LOC110520782 LOC106574119 coding downstream 404523 1732789 ~ 1770434 (+)
tmem131 LOC102783117 coding downstream 531111 1859377 ~ 1967576 (+)
nme7 at233 coding downstream 656060 1984326 ~ 2101039 (+)
G649 NA non-coding upstream 11669 1315407 ~ 1315653 (+)
G683 NA non-coding upstream 17774 1308768 ~ 1309548 (+)
G678 NA non-coding upstream 58962 1267352 ~ 1268360 (+)
G679 NA non-coding upstream 59241 1267396 ~ 1268081 (+)
G674 NA non-coding upstream 72575 1253014 ~ 1254747 (+)
G696 NA non-coding downstream 8048 1336314 ~ 1348949 (+)
G697 NA non-coding downstream 18740 1347006 ~ 1349562 (+)
G740 NA non-coding downstream 159302 1487568 ~ 1488987 (+)
G745 NA non-coding downstream 167307 1495573 ~ 1496694 (+)
G767 NA non-coding downstream 227996 1556262 ~ 1556636 (+)
G583 NA other upstream 317115 1003783 ~ 1010207 (+)
G166 NA other upstream 1007348 318047 ~ 319974 (+)
G51 NA other upstream 1197059 120466 ~ 130263 (+)
G50 NA other upstream 1207015 112959 ~ 120307 (+)
G26 NA other upstream 1233604 56555 ~ 93718 (+)
G961 NA other downstream 750632 2078898 ~ 2079603 (+)
G998 LOC106576565 other downstream 930617 2258883 ~ 2305334 (+)
G2016 NA other downstream 1316069 2644335 ~ 2645169 (+)
G2343 NA other downstream 1886431 3214697 ~ 3216234 (+)
G2464 NA other downstream 2175003 3503269 ~ 3503581 (+)

Expression


Co-expression Network