Gene
RNA
| Item | Value |
|---|---|
| gene id | trnap-ugg |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 3847888 ~ 3847959 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: serine/threonine-protein kinase Nek3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnap-ugg | True | 72 | mRNA | 0.54 | 1 | 3847888 | 3847959 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnap-cgg | NA | coding | upstream | 194 | 3847623 ~ 3847694 (+) |
| LOC118965227 | NA | coding | upstream | 22023 | 3822517 ~ 3826226 (+) |
| bcl6aa | LOC106574104 | coding | upstream | 223306 | 3602663 ~ 3624582 (+) |
| LOC118966170 | NA | coding | upstream | 447740 | 3399426 ~ 3400148 (+) |
| LOC110531937 | LOC106574099 | coding | upstream | 1267580 | 2538334 ~ 2580308 (+) |
| im:7152348 | LOC106573986 | coding | downstream | 558 | 3848517 ~ 3853009 (+) |
| agxta | LOC105025628 | coding | downstream | 1100768 | 4948727 ~ 4957086 (+) |
| LOC110526525 | LOC106613452 | coding | downstream | 1816212 | 5664171 ~ 5767693 (+) |
| LOC110527749 | armc9 | coding | downstream | 2711108 | 6559067 ~ 6651795 (+) |
| b3gnt7 | b3gnt7 | coding | downstream | 2836140 | 6684099 ~ 6700304 (+) |
| G2585 | NA | non-coding | upstream | 33683 | 3813916 ~ 3814205 (+) |
| G2570 | NA | non-coding | upstream | 67210 | 3780289 ~ 3780678 (+) |
| G2559 | NA | non-coding | upstream | 83291 | 3756223 ~ 3764597 (+) |
| G2426 | NA | non-coding | upstream | 175386 | 3650116 ~ 3672502 (+) |
| G2958 | NA | non-coding | downstream | 17042 | 3865001 ~ 3865275 (+) |
| G2963 | NA | non-coding | downstream | 19775 | 3867734 ~ 3871079 (+) |
| G2971 | NA | non-coding | downstream | 32936 | 3880895 ~ 3881979 (+) |
| G2978 | NA | non-coding | downstream | 46132 | 3894091 ~ 3894468 (+) |
| G2979 | NA | non-coding | downstream | 48629 | 3896588 ~ 3906272 (+) |
| G2464 | NA | other | upstream | 344307 | 3503269 ~ 3503581 (+) |
| G2343 | NA | other | upstream | 631654 | 3214697 ~ 3216234 (+) |
| G2016 | NA | other | upstream | 1202719 | 2644335 ~ 2645169 (+) |
| G998 | LOC106576565 | other | upstream | 1584323 | 2258883 ~ 2305334 (+) |
| G961 | NA | other | upstream | 1768285 | 2078898 ~ 2079603 (+) |
| G3176 | NA | other | downstream | 327364 | 4175323 ~ 4178073 (+) |
| G3234 | NA | other | downstream | 550945 | 4398904 ~ 4399444 (+) |
| G3351 | NA | other | downstream | 592007 | 4439966 ~ 4441908 (+) |
| G3596 | NA | other | downstream | 1006562 | 4854521 ~ 4856248 (+) |
| G3597 | NA | other | downstream | 1008566 | 4856525 ~ 4857065 (+) |
