Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118943893 |
| gene name | LOC106574176 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 8224365 ~ 8225267 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: 5-hydroxytryptamine receptor 3A-like |
| id | name | namespace |
|---|---|---|
| GO:0034220 | ion transmembrane transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005230 | extracellular ligand-gated ion channel activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005039281.1 | True | 432 | mRNA | 0.40 | 3 | 8224365 | 8225267 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497697 | LOC106574176 | coding | upstream | 10478 | 8209333 ~ 8213887 (+) |
| LOC110529566 | LOC106574176 | coding | upstream | 24699 | 8192682 ~ 8199666 (+) |
| LOC110529481 | LOC106574173 | coding | upstream | 33137 | 8187929 ~ 8191228 (+) |
| LOC100135997 | LOC100135997 | coding | upstream | 40334 | 8117910 ~ 8197019 (+) |
| LOC110529397 | LOC106574172 | coding | upstream | 61978 | 8152073 ~ 8162387 (+) |
| LOC110501328 | LOC106574178 | coding | downstream | 3922 | 8229189 ~ 8231566 (+) |
| LOC110505168 | LOC106574179 | coding | downstream | 30606 | 8255142 ~ 8271732 (+) |
| LOC110529807 | pfn2 | coding | downstream | 261387 | 8486654 ~ 8494344 (+) |
| LOC110515166 | ankub1 | coding | downstream | 377458 | 8602725 ~ 8612667 (+) |
| LOC110532690 | NA | coding | downstream | 399619 | 8624886 ~ 8634174 (+) |
| G6912 | NA | non-coding | upstream | 76888 | 8145046 ~ 8147477 (+) |
| G6821 | NA | non-coding | upstream | 136620 | 8086029 ~ 8087745 (+) |
| G6844 | NA | non-coding | upstream | 147767 | 8076370 ~ 8076598 (+) |
| G6838 | NA | non-coding | upstream | 156103 | 8067935 ~ 8068262 (+) |
| G6964 | NA | non-coding | downstream | 15168 | 8240435 ~ 8240724 (+) |
| G6967 | NA | non-coding | downstream | 18016 | 8243283 ~ 8249184 (+) |
| G6969 | NA | non-coding | downstream | 27195 | 8252462 ~ 8252670 (+) |
| G6978 | NA | non-coding | downstream | 38383 | 8263650 ~ 8263921 (+) |
| G6983 | NA | non-coding | downstream | 47669 | 8272936 ~ 8274241 (+) |
| G6807 | NA | other | upstream | 187211 | 8036617 ~ 8037154 (+) |
| G6518 | NA | other | upstream | 338458 | 7885391 ~ 7885907 (+) |
| G6434 | NA | other | upstream | 498756 | 7725046 ~ 7725609 (+) |
| G5581 | NA | other | upstream | 1412744 | 6810994 ~ 6811621 (+) |
| G5276 | NA | other | upstream | 1706176 | 6517482 ~ 6518189 (+) |
| LOC118966784 | LOC106574127 | other | downstream | 1233681 | 9450932 ~ 9460358 (+) |
| LOC110510920 | LOC106574155 | other | downstream | 1758508 | 9980527 ~ 9991542 (+) |
| gipc3 | LOC106574151 | other | downstream | 1915977 | 10140230 ~ 10162948 (+) |
