LOC110486340 (fam163a)


Basic Information

Item Value
gene id LOC110486340
gene name fam163a
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 14318536 ~ 14349627 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021557898.2
CCTCTAGCTAGGTTCGTTGAAGTGGCCTTGCGCATGCAATCTCTCTCCCCAACCTAGCCATTCACTCATCCACTCTTAACTTGTTGGATTGGATATCTGCATTTCCACCTTCTGGATTACTGAGTTTCTTTGCGCAGAGAATATAAAAGGATTCCACGAATTAAAATAGCTTTAAGGGCGTAACATTGTTAGTTCCATCATTCTTTCCAAACAATAATTTGATGCGTATCGATTATTTGCTTTTCACAAGTTCGCGTGTGAGTATTTCTTCCATATATTTTTCGTGAGTAAACTAAATTATCACAACGATACCAATTTTTCACCGGATGATAATCGTTATTCCTATTCTCTGACCTCTATTGAACATAGCCTACTATCCATCACCAAGACTGTTGCGTTCTTCCAGAGACAACACACGGTGCAGGCTACTCATCGGATGACAGTCCACTGCAATCCGTAGCCTATCAAGTGCCTTCTTTTATTTTCGGCAATGCAATAACGTTTTGCCGTGCCTTTAACCGTGGTAAAACTCAAGAGCAATAACGCAAGTTGAGGAAACGAACAATGTAACACCCACAGTGTCCGACAGAGTTTGATGGAGAGCTGGTCGGATGACAGCTGGAACTGTTGTCATAACCGGAGGAATTCTCGCCACGGTGATACTCTTGTGTATCATAGCAGTGCTCTGTTACTGTAGACTccagTATTACTGCTGTAAGAAGAATGGGTCAGAAGGGGACACCAGCTCCGTCACGCAGCCCCACTTTGCCTGCAACGCATGCAGTGCTCCCGGGGTGGACGGGACGGCCgtcactcccctctccctctccccggaACTCCCTGCCTCTCACGCCACGGGCCCCCCACGTAACTACTGCCCCACCTGTTCGCCCTACGAATCACCCTTCTATATCCGAACCACCGACGAGATGCACAATGGCGGCGAGCGCATCACCTACATGCCCACGCACTATGAGAACCCAGCCCTGGCTCTCGCCCTGCCCTCCCTGCATGGCTCCCTGCTGAGCACCAGCCAGCATCGCAGCAACCCAGCACCGGACTTCTACACCAACACTCGCGCTATAAGTACAGACGTGTGACCCACTTCCGATGTCCTGTTGGCTCATTTGGTTGGAGCGTGGTGTTTTCTACTGCAGGGTTGTGAGCTCAATCCCTGCATAGGTCATGCACTGTACACAGAATATTTGTTCAttattgctttggataaaagagaCTGTTTTTATGAGGGTAATCTCTGGTAGCCACTGTGTCTCTCTGCTGACAACTAAAGAGAAGAGGATGAAAAAGGAGCATTGAGAGACAACATGAAGCGTTGACCCTTTGACCTGGTCATGCACTTCCTTGTTCTTTCTCCCTACACTGTGTCAGCTAGCTTCCAGCTGGATTTGAGCACACTCAAACAGTATTGTTTTTTAAACAGAGGTAGCTATCATGTTTGTTGCTGTTTAATTAAAACCTAGACTCCTGTAATACAGAGGCAGGGAGCATCCCTTAGTGTTCAATAGACCAAGACCTATACGCTGTCTGGCGAGGTAGTGTGTGGGATTCTAATCTTCACTGTTCGAGGGCTATCTATATTGTGGTTTTACCTGGACCTACTCTTGTCATTTCCCTGTATCTGCCAAAAGAGATTCTGAACTACAAATAAAAGCAAACTGCATTTTCAAGTGAAGGTATTCAGAAGAAAATGAACGTAGCAAAAATAGTGAAGAGACCCTAACTCCTTCAGAGCTTTCTCTATGCAAGTTCTATGCACGCAAAACCTGAATTGGTTGGAGAGAAAAGTATAACGATGCAGCTGTCCAGCTtgtatgtttttttccccctccaaaTGTTTGTCATATGTAAGTGGAACTATTGAAAGACTGTTGTCTATTGTTTTATGTTATTGAAAGAGGTATGTAGCCTACCATGGCTACTTTTGAGACAATGGAATTTGATCACATAATATAATAACTAGAATATTACAGTTTAAAGATAGTTTTCACGTCAGGACAGGGGCATTTTGTAAGTGGGTGAGGCAGTATTGCAGTTAGTGATGATTTGTCTGTCTCTGCACCTGTGTCATTAAGTGGACTACCAGTCTTTGTGCAGAACACTGAAGCTACAGTACAGTTCAAATTGTATTTCTCTTCATTGACAATGATGCAAAAAGTTgaaaatgtatatattaccaAATGCATTGAAAGCATTTCTATTTGTTTGTCTCTTTGATTAACTGGCTGATGACTTTTTGGATTCGGTCAGGATGCATTTTGAATTGGGGTGTGTAAGTCTGGTATGATGTAGATGTAGTTTGTGCCATTTGGTGTCCGCACTCTTCTGATCATCTAATTGTTGATTCTATGAACTGTACACATCCATGTATTTACACATTTGAGTGTTTATTTCAATTTATGAAGAACTTGAAATACAATATTTATGTAATTGGTAACTAAATACATAATTATTAACCTTGTTATATGGCACTCATTTTTAACCAATTATTAGACAACATTGCTTGCCATGTATGATATTATTTTGCCCTGATGTCTTTTTATGTTTTAGTGTGAAACAGCAAAAAAATGACAGACATGTATGATAGGGGCGATACTAATTTTACTATAGGTTTCTAAAAGCACCCCCATCAGCTACTTCTGTATAGAGCTGAAAAGCCCTATCATACCTGTGACAACAGCAATGCTCATATGGATACAACGATACCAACATAAACATACATGTGTCTATTAAGTCCTTACACTTTTGATTAGATGTTACAGGTTTTTTTCCACCAGTGCAAGTCTTGTACTTGTATTTTTGTCCAACATTAAATAAAGGAATGCATATATTGGAAAAAATTCTGTAAGATGTAGATTGAAGAAGGAAGCTGTTATAAAATGATTGTCCATTGAAAAAGCAGTCGTGTGTTAGGGCGTTGTTTCTAGTGTTTATTTGCTCTTTAAAAAGGGGTGAAAAATGTGTGTCTGTtcaaaagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtctgttcaatccgaacaaagacaaaacatttaaattgaGAATATCTACCGAATGACATGCCCCATAagaatacattttcatatttaaTTCCTGTTGGTTTAGGTTATTCATAAAATAactaacaatttaaaaaaaaatactatgcTAAAACAAAAGAGTGAAATATTAAAAGAGAACAAAATATATACATATCTCACATTGTTACCTTGTGACAATTAAAGATTTATAACTGCTTGAAA
>XM_036947452.1
GGGGTTTCCTCTCCCGCCCTGCAGTTTCCTCTCCCGCCCTGGGGTTTCCTCTCCCACCCTCAGAACAATCTTCTGATGTGAGTACAGTACACAGGGGCCGATCTGTCATCGagtcttaacccccccccccattctcttATCAAATGAGATGTCATTGAGAATGCCAATGTCCTGGTCCAATAAAAACCAAACAAGTAATGAAATTAAATAGTAGTAAGAGAGGAGAACACCTCCACTGTTAcagaaggctactgtacattACAAGCAGGCATGTTGCAGTATACTAATCATTGACATTGTCTGAGATCATTGTACTGCCCATGATCTTCTCTCTTACAGGTTTTATTGCACACTTTGCTGAACGTGAGTTCCACTTTCTTCCCAAGAACAGGGTTTTTCAATCCTGGTCCTGGCAACACAAATTAGTTTTTGCCCTAGCATtcacacacctgattcaaattaAAGGCTTGATGAGGAGATGATTAGATGATTCATGTTTTATGGTATTCAGTTCGTCTGGGTCATGTTCTGAATGAAATAGGAAGGTACTATCTGAACATTAGAACACACATTCtcattttccgttgcaaaacattttgctacattgTGTCCTACTGAATACGACCCAGATTTCTGTTTGTCCAGTGGCCATCTGTGATGATTGTGCCACTTCTTGTGCCTTCAGAGTTTGATGGAGAGCTGGTCGGATGACAGCTGGAACTGTTGTCATAACCGGAGGAATTCTCGCCACGGTGATACTCTTGTGTATCATAGCAGTGCTCTGTTACTGTAGACTccagTATTACTGCTGTAAGAAGAATGGGTCAGAAGGGGACACCAGCTCCGTCACGCAGCCCCACTTTGCCTGCAACGCATGCAGTGCTCCCGGGGTGGACGGGACGGCCgtcactcccctctccctctccccggaACTCCCTGCCTCTCACGCCACGGGCCCCCCACGTAACTACTGCCCCACCTGTTCGCCCTACGAATCACCCTTCTATATCCGAACCACCGACGAGATGCACAATGGCGGCGAGCGCATCACCTACATGCCCACGCACTATGAGAACCCAGCCCTGGCTCTCGCCCTGCCCTCCCTGCATGGCTCCCTGCTGAGCACCAGCCAGCATCGCAGCAACCCAGCACCGGACTTCTACACCAACACTCGCGCTATAAGTACAGACGTGTGACCCACTTCCGATGTCCTGTTGGCTCATTTGGTTGGAGCGTGGTGTTTTCTACTGCAGGGTTGTGAGCTCAATCCCTGCATAGGTCATGCACTGTACACAGAATATTTGTTCAttattgctttggataaaagagaCTGTTTTTATGAGGGTAATCTCTGGTAGCCACTGTGTCTCTCTGCTGACAACTAAAGAGAAGAGGATGAAAAAGGAGCATTGAGAGACAACATGAAGCGTTGACCCTTTGACCTGGTCATGCACTTCCTTGTTCTTTCTCCCTACACTGTGTCAGCTAGCTTCCAGCTGGATTTGAGCACACTCAAACAGTATTGTTTTTTAAACAGAGGTAGCTATCATGTTTGTTGCTGTTTAATTAAAACCTAGACTCCTGTAATACAGAGGCAGGGAGCATCCCTTAGTGTTCAATAGACCAAGACCTATACGCTGTCTGGCGAGGTAGTGTGTGGGATTCTAATCTTCACTGTTCGAGGGCTATCTATATTGTGGTTTTACCTGGACCTACTCTTGTCATTTCCCTGTATCTGCCAAAAGAGATTCTGAACTACAAATAAAAGCAAACTGCATTTTCAAGTGAAGGTATTCAGAAGAAAATGAACGTAGCAAAAATAGTGAAGAGACCCTAACTCCTTCAGAGCTTTCTCTATGCAAGTTCTATGCACGCAAAACCTGAATTGGTTGGAGAGAAAAGTATAACGATGCAGCTGTCCAGCTtgtatgtttttttccccctccaaaTGTTTGTCATATGTAAGTGGAACTATTGAAAGACTGTTGTCTATTGTTTTATGTTATTGAAAGAGGTATGTAGCCTACCATGGCTACTTTTGAGACAATGGAATTTGATCACATAATATAATAACTAGAATATTACAGTTTAAAGATAGTTTTCACGTCAGGACAGGGGCATTTTGTAAGTGGGTGAGGCAGTATTGCAGTTAGTGATGATTTGTCTGTCTCTGCACCTGTGTCATTAAGTGGACTACCAGTCTTTGTGCAGAACACTGAAGCTACAGTACAGTTCAAATTGTATTTCTCTTCATTGACAATGATGCAAAAAGTTgaaaatgtatatattaccaAATGCATTGAAAGCATTTCTATTTGTTTGTCTCTTTGATTAACTGGCTGATGACTTTTTGGATTCGGTCAGGATGCATTTTGAATTGGGGTGTGTAAGTCTGGTATGATGTAGATGTAGTTTGTGCCATTTGGTGTCCGCACTCTTCTGATCATCTAATTGTTGATTCTATGAACTGTACACATCCATGTATTTACACATTTGAGTGTTTATTTCAATTTATGAAGAACTTGAAATACAATATTTATGTAATTGGTAACTAAATACATAATTATTAACCTTGTTATATGGCACTCATTTTTAACCAATTATTAGACAACATTGCTTGCCATGTATGATATTATTTTGCCCTGATGTCTTTTTATGTTTTAGTGTGAAACAGCAAAAAAATGACAGACATGTATGATAGGGGCGATACTAATTTTACTATAGGTTTCTAAAAGCACCCCCATCAGCTACTTCTGTATAGAGCTGAAAAGCCCTATCATACCTGTGACAACAGCAATGCTCATATGGATACAACGATACCAACATAAACATACATGTGTCTATTAAGTCCTTACACTTTTGATTAGATGTTACAGGTTTTTTTCCACCAGTGCAAGTCTTGTACTTGTATTTTTGTCCAACATTAAATAAAGGAATGCATATATTGGAAAAAATTCTGTAAGATGTAGATTGAAGAAGGAAGCTGTTATAAAATGATTGTCCATTGAAAAAGCAGTCGTGTGTTAGGGCGTTGTTTCTAGTGTTTATTTGCTCTTTAAAAAGGGGTGAAAAATGTGTGTCTGTtcaaaagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtctgttcaatccgaacaaagacaaaacatttaaattgaGAATATCTACCGAATGACATGCCCCATAagaatacattttcatatttaaTTCCTGTTGGTTTAGGTTATTCATAAAATAactaacaatttaaaaaaaaatactatgcTAAAACAAAAGAGTGAAATATTAAAAGAGAACAAAATATATACATATCTCACATTGTTACCTTGTGACAATTAAAGATTTATAACTGCTTGAAA

Function

symbol description
fam163a Predicted to be integral component of membrane.

NR:

description
protein FAM163A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021557898.2 False 3281 mRNA 0.41 3 14318536 14349627
XM_036947452.1 True 3377 mRNA 0.41 2 14346136 14349627

Neighbor

gene id symbol gene type direction distance location
tdrd5 LOC106574052 coding upstream 14430 14251389 ~ 14304106 (+)
axdnd1 axdnd1 coding upstream 74124 14220167 ~ 14244412 (+)
LOC110486057 NA coding upstream 103597 14192456 ~ 14214939 (+)
LOC110485979 LOC106574047 coding upstream 133279 14172519 ~ 14185257 (+)
LOC110485648 LOC106574045 coding upstream 146936 14162385 ~ 14171600 (+)
LOC110486505 LOC106574055 coding downstream 918 14350545 ~ 14495848 (+)
gpr52 LOC106574057 coding downstream 50952 14400579 ~ 14406157 (+)
LOC110487584 LOC106574067 coding downstream 644310 14993937 ~ 15003427 (+)
LOC110487655 LOC106574076 coding downstream 666511 15016138 ~ 15019092 (+)
elav1 elav1 coding downstream 674792 15024419 ~ 15026535 (+)
G12692 NA non-coding upstream 127721 14126330 ~ 14190815 (+)
G12680 NA non-coding upstream 219245 14099008 ~ 14099291 (+)
G12675 NA non-coding upstream 227185 14090734 ~ 14091351 (+)
G12670 NA non-coding upstream 234560 14083471 ~ 14083976 (+)
G12663 NA non-coding upstream 249850 14068471 ~ 14068686 (+)
G13121 NA non-coding downstream 71778 14421405 ~ 14421630 (+)
G13334 NA non-coding downstream 219472 14569099 ~ 14571242 (+)
G13359 NA non-coding downstream 284336 14633963 ~ 14635553 (+)
G13363 NA non-coding downstream 292736 14642363 ~ 14642610 (+)
G13364 NA non-coding downstream 293103 14642730 ~ 14642996 (+)
G12410 NA other upstream 686646 13617059 ~ 13666871 (+)
LOC110538561 LOC106574035 other upstream 1058540 13238613 ~ 13295452 (+)
LOC110523899 LOC106574090 other upstream 2804154 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 4157250 10140230 ~ 10162948 (+)
G13380 NA other downstream 329723 14679350 ~ 14679578 (+)
G13381 NA other downstream 330071 14679698 ~ 14680027 (+)
G13391 NA other downstream 350549 14700176 ~ 14700730 (+)
G13434 NA other downstream 462144 14811771 ~ 14812624 (+)
G13639 NA other downstream 611927 14961554 ~ 14962003 (+)

Expression


Co-expression Network