gpr52 (LOC106574057)


Basic Information

Item Value
gene id gpr52
gene name LOC106574057
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 14400579 ~ 14406157 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021558308.2
GGACAGAGATTAGCTTAGTCATTTCGTAATAGGGAACATGTCCAAATTTAGCTCTCTGAAaaaagagatggtgagagagagagactgaggattGTGGCTGGGTTGAGAGAGGACCTCAGGTGGAGCCTAAATgggagtgggtagagagagagacactgtatgagaaggagggggtagagagtgagCGGGTGTATGAGAGTGAGGGGCAGAGCATGGTTCCGAGAGAACGAGAaagccagggagggagggagtgagtgccagagagagtgtgtgtgtgtgcagggtagAGGGAGTGTGcggaagacagggagagggagagcgtgaGCGAAGGGAACGGGAACTGTAAGCCAGTCACAGTATCTCCTTCCCACTGCACCAGCGGTGATGGACAGCTCCTCTCCTCGCCGCTCTTCAAAAGGTTCCTATTTATTTTCAGTAGCTTTAGCTTTGTCTTCTGTACTTCACTCCAGGAAATTGTATTTTTGTCTGTTCAGGTATTTATTTGTCGTAAGCTCATTTCGACtggggaaatgagaggagagagagacagaggacagcacTGAAACTGGGACTGTCTCTGTACTGGTGGAGTGGTTTCTCTTTTTTTTGTGCCTGGGTATTTGCTACGAGGTGCAGACGTATTGGGTGGAAGAAAGAGTCGAAAGGCCAGAAAGCCACGCCTCCCCTAAACAAAAAGCTCATTTGAATGGACATGTATAAGTAATATTATCAATAGTGGAAACGAGGGGAGGCTGATGTAAAGCGCTTTCACCCGTAGCTATTTGGGGAATGTCACTGGCAAAACAGAACCAAAAACAAGTTGAAGGGATAAAGAAGTGGAATGCAGATCCCACACCCATCGCAGAGTGCGTCCTGAAGAGGATTTCTAAGGTGACACAGTCAGAGGAGCTGAGACACTCAGATGGCCTCTACCCGCTCTAGTACCCATTGATTGGGATTGTGTGTAAGACTGTTGGCAACTCCAAAATTCTTTGCCTCAATCTTCTTTACAACCAGCTTTTGCCTCTCACAACCTTGAGGACGAAAGTTTCATAAAAGTGTGTGGATTGGGATTTCAGAGATCAAAGCTTGATTTGTGGCTCCAGcgtgcgcgcgcgcacacacaacaGAATACGGATTTTGCTGCGCCTCGTTTAGCCTCTCTCTGACTGGAGAGCATTGTAAACATAATTCCCCCAGTGCTCTGTGGAACGAGAGCTGTGACATTAACACCCGCCGAGAGCCCAGTGTTTTTCTAGCGTGTCTGTGTTTTGATTCGGACAATAGCTGAGCATACATGGGGTCAAGACTCGCTACTCCAAAATAAGAGGATGCATACAACAGGACTGAAAACTAACTGCTGCACTCCAGACTTTAGAAGGGACTTTATTGGAGGTAAAAACCAAACACAATGGCTAATGTGGATGTAAATACTCCTATGACTTCTGGATTTTCTCATCTGCTCTTTTTCTGACGCTGAACAAGCTATTTGAAAGCCTAAATGACATTCTTGTTCTAACAGTAaatgttttaacactttttttctctTATCGATAATCTCAAGATAGGAGTCACATGCTCCTTGTCTTATTTAATCAGCGGTAGGATCTGCACCGTGTCTGCCTGCATGCTTCTTTCCCACATGTCAACTACCCTGCACCTCCTGCGCTTTTTGCCCTTGTGAGGACAGCCCCTGCCCTCATCCCCTAGCCGCCCAGAGGCAGGAGATGTGGCCAGGGACTGTCAGGAACCGCAGTGGGGATCCCTGCCGCCGGGATAGATGCTTGGTGTAACATTGGCCGACCTTTTTCTGTTTGTGGAggcaatatatatttttctttcttCAACAATAACCCCACTGGCTCTAAGCATGACTGATCAGAAAAGGAGAGCCAAGCTGGTACTCTTGTTTTCCTGTGGGCTGTATTGATTTTCGTCAGTCAGTGTTCATTTGATTGAGACCCAACTATGTGAGAGCAAAAGTGAAAGAGAGCGAGGATAAAGCTCTGTTTGCTGTGGgaggctacagacagacagcaggggcGGACTGGTCTCCAGTTACAGACCATCTGCATCGCAGGTGGCACAGCACAAACCTGACCCACCAGGACCGCGCCCACAACAATGAATCAGTCAGCGCTGACAACAGACCTGGTACCCACTGCCAACAGCAGCCTTGTGGGCCCGGATCCCAACCACTCTTGCCCCCTTGGCTGGGGCCAGAATGAGGGCCTGGAGGCCTGCGTCTTGGAGACTGCCGTCATCGTGCTACTGACAGTGCTCATCATCGCTGGAAACCTGACGGTGATCTTCGTGTTCCACTGCGCCCCGCTGCTGCACCACTACACTAccagctatttcatccagaccATGGCCTATGCTGATCTGCTGGTGGGCCTCAGCTGCCTGGTGCCCACCCTGTCCCTGCTGCACTACCCGGCCGGCGTCCAGGAGCCCATCACCTGCCAGGTCTTCAGCTACGTCATCTCGGTACTCAAGAGTGTCTCCATGGCCTGCTTGGCCTGCATCAGCGTGGACCGTTACCTGGCCATCACCAAACCCCTGTCCTACAACCAGCTGGTGACGCCGTGCCGGCTCCGTGGCTGCATCGCTCTCATATGGGTCTACTCCTGCCTGATGTTCCTGCCCTCCTTCTTTGGCTGGGGCAAGCCGGGCTACCACGGAGACATCTTTGAGTGGTGCGCCCACTCCTGGCCCACCTCGGCGCTCTTCACAGGCTTTGTGGTGTGCCTGCTATACGCGCCCGCTGCTCTGGTTGTCTGCTTCACCTACTTTCACATCTTCCGCATCTGCCAGCAGCACAACCGGGAGATCAGTGAGAGGCGGGCACGCTTCCCCAGCCAGGAGATGGAGGCCGGGGAGGGTGGTGGCAGTGGTAGCGGCGGGGGGCACCACACGGGTCACGGGCCTGACCGGCGCTACGCCATGGTGCTCTTCCGCATCACCAGCGTCTTCTACATACTCTGGCTGCCCTACATAATCTATTTCCTTTTGGAGAGCTCACACGTGTTGGACAACCCCGCCCTGTCCTTTGTAACCACCTGGCTGGCCATCAGCAACAGCTTCTGCAACTGCGTCATCTACAGCCTGTCCAACAGTGTGTTCCGCCTGGGCATGCGCCGCCTCTCGCAGACACTCTGCTCCTTCAGCCACTGTGCAGCCGACGACAGGGACTTTGGAGAACCCAAACCCAGGAAGAGGCCAAAGTCCTGCTCCATCTGAGGAGTTGCAGGCTATTGTTAAAGAAGCCACACATTTGGTTACACAAGGTTACATCTTTACAAAGCTGCTGACTTTTCAATTGACAGGGCTGTCCCAAAGAAAAATACTTTAGGCTCTGACGGTTTGTTTGAAGAATACCAATGACTTTGCTGTATTCATGCCAAGTCATGATTTATGGGCAAAAATGTGATTGCTGAGAGAAGCTAGATTTTTGTAAAGGTTTAGTTTCTGAACTAAGTGGATGAGAGATTGGCACTACATTTTGACTTTAGACCTGCGAAGTGGGGTATAGctggtaaatcaaatcaaagtttattggtcgcttACACAGTTTAGCAAGTGGTATAGCAGGTGCAGTTAAATgcatgttactagctcctaacggTGCAGTAAAATATCAAACAAGTACAAACAAAAccaaaaaaacaagaaatgtcAGAACGAATCAAATTAACTCCAATATCAGTAATCCATATgctgtacatgtactgtatgtacagccTTATGTACAACATCATTCCACCATGGTTACCATGGTTACCTCAGGCTTTGACGTTTACATTTGTTTGTTTCTCGTCAGTCAGGTTAAGTAAAGGACAAAGTTAGGACAAAACACTTTCCTCAAACATTGATGGTGACCTCATGATTTTACTGTCTCTGATTTCACTGTTTTGTGgactaaaatgtattgaatttgaATGCCAATATTGGACTGCTACTATAGGCCTGTGTTCTTAGTAGGCACGCGAAGGCTGAATTAGTACAGACATCAACACGTAATCCTCATTTGCATACACTCCCTTTAGGAGTTCACATGTGCGTGCAAATGGCTGACTATTCACTTACTGTATATACATGCTCCTTGGCAATGGTGGCGCCCACCACACTGATGTACATAACAACAGATCGTTCGTTGCCTTGACCTGTCATGAAAAAGTTTAGCAGAGTTTGCAGAAGGTTTGTTAGCAAACACAACATTGTTCAACGTGTGTTTTAAAAGACTTTCGGgcagccctaaacagagagacgTGGGAGTCAATTTCACGAGTTAAGCAAactacaaaaaaaacacaaagctGGTTTAGTTTTAGtagatatttatatattttggcGTGGAActttttagtaaaaaaaaaaacaaaatactttgtCAATGCCTCAGATCCAGTAGCTGTTTAGATGAGTGATTGGTCATGTCCACTAGTGAACACTACCCTCTTTATCTTTGGCTGCTCATCAGAGATCGTCTCCACTTCAGCATCAGCTTCATATGTATGACTCTGTCCCCTTACCTTTTCCATGCTAAGTTTTATTTACCTTTTTTAAGTGCAGAGCCTGTTCCTTTTTAGGTGCAGTAAATGCATCATGACGACTGGTCTTGTGTATTTTACTGTTTGATACAGCACAGGTGTAGTCATTCCAAGCTTTTCTCGTACATTCTCAGAATTCTGCATTTTATTTTAACAGATAATGTTGAAATATCCATACAGGGGCACATTTTCAGTAATACCCAAGACTATTGTGAGATGAGATTCTTATGGTTGTAGGCCATGTGTAGGTAGACCTGTGTGGAAAAACAAGCAGCACAGCCAACTTAAACTCTCTATATCGTGACTGTTTATGTTCAACATTATGCTGCTTAACCTGTGTATTCATTCCTCTTTTTGCTTTACAGATGGTTCTGTATATGTGcctaaagatatatatatatatatatattttggaaaATAGATCACAAAGATGTACATTCTGTTCTTCTATATGGTTACAAGGATACACTGcacttatttgtatttattttttacactggCTGTGTGACATTGCATTTTGTAACGTGACCTTCCTTTTGACTTGACCCAAAATCCATCAAGCTTGTATTTGCAGTAGTACCATACAATGGTACCATCTTGTTTCAACaccttttcaaatcaaatgaacttttatttgtcacatgcaccaaatacaaggtatagactttactgtgaaatacttcgagccctttcccaacaatgcagagttaagaagtgaaaaggaaatagtaacacaataaaataacaataacatatACTGGTACCGAGTCATTGTGCAGGGGAATGGGGTAGTTGAGGTTATATGTACATGTCAGTAGGGTGAAAGGTGACTTGGcaatcaggatatataataaatcaagtagcagcagtgtctgTGAAAGTGTGTTTTGGCGTCAATATGCGCGCGTATGTGAGcgtacagagtgtacaaaacataagggacaccttactaatattgagttgcacccccttttgccgccagaacagcctcaattcatcggggtgtggactctacaaggtgttgaa

Function

NR:

description
PREDICTED: probable G-protein coupled receptor 52

GO: NA

KEGG:

id description
K08407 GPR52; G protein-coupled receptor 52

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021558308.2 True 5579 mRNA 0.46 1 14400579 14406157

Neighbor

gene id symbol gene type direction distance location
LOC110486340 fam163a coding upstream 50952 14318536 ~ 14349627 (+)
tdrd5 LOC106574052 coding upstream 96473 14251389 ~ 14304106 (+)
axdnd1 axdnd1 coding upstream 156167 14220167 ~ 14244412 (+)
LOC110486057 NA coding upstream 185640 14192456 ~ 14214939 (+)
LOC110485979 LOC106574047 coding upstream 215322 14172519 ~ 14185257 (+)
LOC110487584 LOC106574067 coding downstream 587780 14993937 ~ 15003427 (+)
LOC110487655 LOC106574076 coding downstream 609981 15016138 ~ 15019092 (+)
elav1 elav1 coding downstream 618262 15024419 ~ 15026535 (+)
LOC110487930 LOC106574072 coding downstream 669027 15075184 ~ 15080304 (+)
LOC110529430 LOC106574078 coding downstream 711693 15117850 ~ 15126002 (+)
G12692 NA non-coding upstream 209764 14126330 ~ 14190815 (+)
G12680 NA non-coding upstream 301288 14099008 ~ 14099291 (+)
G12675 NA non-coding upstream 309228 14090734 ~ 14091351 (+)
G12670 NA non-coding upstream 316603 14083471 ~ 14083976 (+)
G12663 NA non-coding upstream 331893 14068471 ~ 14068686 (+)
G13121 NA non-coding downstream 15248 14421405 ~ 14421630 (+)
G13334 NA non-coding downstream 162942 14569099 ~ 14571242 (+)
G13359 NA non-coding downstream 227806 14633963 ~ 14635553 (+)
G13363 NA non-coding downstream 236206 14642363 ~ 14642610 (+)
G13364 NA non-coding downstream 236573 14642730 ~ 14642996 (+)
G12410 NA other upstream 768689 13617059 ~ 13666871 (+)
LOC110538561 LOC106574035 other upstream 1140583 13238613 ~ 13295452 (+)
LOC110523899 LOC106574090 other upstream 2886197 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 4239293 10140230 ~ 10162948 (+)
G13380 NA other downstream 273193 14679350 ~ 14679578 (+)
G13381 NA other downstream 273541 14679698 ~ 14680027 (+)
G13391 NA other downstream 294019 14700176 ~ 14700730 (+)
G13434 NA other downstream 405614 14811771 ~ 14812624 (+)
G13639 NA other downstream 555397 14961554 ~ 14962003 (+)

Expression


Co-expression Network