LOC110489303 (dbt)


Basic Information

Item Value
gene id LOC110489303
gene name dbt
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 15425122 ~ 15432764 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021562052.2
GAGTGGACAATCCCTTCACGCTGCCCTATTTGTGACTGATCTCCGATTGGCCATTGAAAGGGGTGGGCATTGTTCGTCAGATCCGAACGAAACAAAGATGGCGGCATTTACTAGAGGCTCATTCACATTTATGAGACGCTTGATTTTGGAACACCGGCACAAGCGTTGCTGCTCCAGGGTCCAAACTGGCCGACCAGACTACACCCTCCATCCCCACTCTGTCTTCATCCCTCAGCTGTGCAGCACTAGGTTTTTTCGCACAAGTTATGTCACACCAGGACCAATTCTGCCATTCAAACTTTCAGATATTGGTGAGGGCATCATGGAGGTGACGGTGAAGGAATGGTATGTAAAGGAGGGAGACAAGGTGTCTCAGTTTGACAGCATCTGTGAGGTACAGAGTGACAAGGCATCTGTTACCATCACAAGTCGCTATGACGGTGTCATTAAAAAGCTCTACTATGAGGTGGATGCTACAGCCTTAGTGGGCACAGCACTGGTGGATATCGAGACAGAGTCCGGTCCGGAGGTGGCCCATGAGGAGGATGTTGTGGAGACCCCGGCAATGTCACACGATGAGCACACACACCAGGAAATCAAGGGACACAAGACCCAGGCCACCCCTGCAGTCCGTCGTTTAGCTATGGAGAACAATATAAAGCTGAGTGAAGTGGTCGGAACGGGGAGAGACGGACGGATCCTCAAAGAGGACATCCTCAACTTCCTGGCCAAACAGACAGGGGCCATCTTACCCCTGACCCCATTCCACGAGATTCAGCCTCCACTTCCCACAGCATCCGCCCCCTCTTCGGGTGTCAAGCCCAAGGCGAAGTTCCCACCAAGTGTTCCGCTCCCTGCAATCTCCAGGCCTGTCTTCTCGGGCACGGACAGCACTGAGCCCCTGAAAGGTTTCCACAAAGCGATGGTAAAGACCATGACTGCCGCCTTGAAAATTCCCCACTTTGGGTACTGTGATGAGGTGAACCTGACCAGGCTGGTACAGCTGCGCAAGGAGCTGAAGGGCCTGTCAGAGGCTCGTGGTGTCAAGCTCAGCTACATGCCCTTCTTCATCAAGGCTGCTTCTCTGGGCCTACTCCGTTTCCCCATCCTCAACGCCTCGGTGGATGAGGCTGTTCAGAACATCACCTACAAGGTGTCCCACAACATTGGCCTGGCCATGGACACGAGCCGGGGTCTGCTGGTACCCAATGTGAAGAATGTGCAGATGCTGAGTGTGTTTGAGATTGCCGTGGAGCTCAACCGCATGCAGACTCTGGGCGCCACGGGCCAGCTGGGCACGGCCGACCTCACAGGAGGCACCTTCACCCTCTCCAACATCGGCTCGATTGGAGGCACGTATGCAAAGCCAGTGATTTTGCCTCCTGAGGTGGCGATTGGCGCTCTGGGAAAGATCCAGGTCCTGCCGAGGTTTAACTCAAGGGACGAGGTGGTGAAAGCTCACATCATGAATGTCAGCTGGTCGGCAGACCACCGGATCATCGACGGGGCCACAATGGCGCGGTTCTCGAACCTGTGGAGGGACTACCTGGAGAACCCAGCATCAATGGTCCTGGACCTAAAATGAGCCTGCGGCACCCTGGACGGCCTCCTCTGGATGGAGCTCTGCGACGCAAAACCAGTCACCATGATTATGTGAAAATGGTCTACTGTACTCTGACTCTCTGGGTAGTCACATTGACTGGGTGTTACTGGTCCCCATACTGCTCCCGCCTCCTTGGCCTTCCAAAACCTTTCTTTCTCAGAATATGAATGGCTGCACATGCCACAGACACTACAAGTTACCTACTACTCAACATTGTGAAACTAATATCTAGTTGCAGGCTGTTTTATCTTTGTGTGTGGCCTTAGTTTTATTTCTCTCTTCCGGTTGCCTTACTGACATAGGATGGTTAGGAACAGTAGCGCTTTTTGCTGAAGAGCTGAATTTTGGAAAACAAACCTGCTCTATTTCTGAAATACTGTATGGCTCTGTAAAAAAAGGCCCTGCACCTTTAAGGGTATTGGTGCCGAAACCAGGGAATAACCTTAAAGGTGCAAggcctttttaatttttttttatggcCCCACACAttcccacagcaacactagaaaGCTCTTTTCAAGAGAATGTGTGATTTAGTGATTCCCCTTGAAAAGCATCATTGCACAACATGCACTTGTGAGTGTACACATCTGCTATGAGTGGACATAAGGCTCCTACAATAGCTCCACAATTGTTAGTTTGATCAATTTATCTGTTACAGTTGCTGCTTTTCTAGAAAAGCAGTATCTGCTTTTATTGCTGTCAGATAATGTATTGCTTTAAAAAGAAAGTATAAAGTTATGGTTGGAAGTGAACACCCAGTGTTGTGCATTATATGTTCCCCAAGACTCGTGAAGCTCATTATTTTGGCAAAATAAAGCCTTTCATTTATCTA
>XM_036950356.1
GAGTGGACAATCCCTTCACGCTGCCCTATTTGTGACTGATCTCCGATTGGCCATTGAAAGGGGTGGGCATTGTTCGTCAGATCCGAACGAAACAAAGATGGCGGCATTTACTAGAGGCTCATTCACATTTATGAGACGCTTGATTTTGGAACACCGGCACAAGCGTTGCTGCTCCAGGGTCCAAACTGGCCGACCAGACTACACCCTCCATCCCCACTCTGTCTTCATCCCTCAGCTGTGCAGCACTAGGTTTTTTCGCACAAGTTATGTCACACCAGGACCAATTCTGCCATTCAAACTTTCAGATATTGGTGAGGGCATCATGGAGGTGACGGTGAAGGAATGGTATGTAAAGGAGGGAGACAAGGTGTCTCAGTTTGACAGCATCTGTGAGGTACAGAGTGACAAGGCATCTGTTACCATCACAAGTCGCTATGACGGTGTCATTAAAAAGCTCTACTATGAGGTGGATGCTACAGCCTTAGTGGGCACAGCACTGGTGGATATCGAGACAGAGTCCGGTCCGGAGGTGGCCCATGAGGAGGATGTTGTGGAGACCCCGGCAATGTCACACGATGAGCACACACACCAGGAAATCAAGGGACACAAGACCCAGGCCACCCCTGCAGTCCGTCGTTTAGCTATGGAGAACAATATAAAGCTGAGTGAAGTGGTCGGAACGGGGAGAGACGGACGGATCCTCAAAGAGGACATCCTCAACTTCCTGGCCAAACAGACAGGGGCCATCTTACCCCTGACCCCATTCCACGAGATTCAGCCTCCACTTCCCACAGCATCCGCCCCCTCTTCGGGTGTCAAGCCCAAGGCGAAGTTCCCACCAAGTGTTCCGCTCCCTGCAATCTCCAGGCCTGTCTTCTCGGGCACGGACAGCACTGAGCCCCTGAAAGGTTTCCACAAAGCGATGGTAAAGACCATGACTGCCGCCTTGAAAATTCCCCACTTTGGGTACTGTGATGAGGTGAACCTGACCAGGCTGGTACAGCTGCGCAAGGAGCTGAAGGGCCTGTCAGAGGCTCGTGGTGTCAAGCTCAGCTACATGCCCTTCTTCATCAAGGCTGCTTCTCTGGGCCTACTCCGTTTCCCCATCCTCAACGCCTCGGTGGATGAGGCTGTTCAGAACATCACCTACAAGCTTCTTTTTCGTCTCCTCCACCAGGTGTCCCACAACATTGGCCTGGCCATGGACACGAGCCGGGGTCTGCTGGTACCCAATGTGAAGAATGTGCAGATGCTGAGTGTGTTTGAGATTGCCGTGGAGCTCAACCGCATGCAGACTCTGGGCGCCACGGGCCAGCTGGGCACGGCCGACCTCACAGGAGGCACCTTCACCCTCTCCAACATCGGCTCGATTGGAGGCACGTATGCAAAGCCAGTGATTTTGCCTCCTGAGGTGGCGATTGGCGCTCTGGGAAAGATCCAGGTCCTGCCGAGGTTTAACTCAAGGGACGAGGTGGTGAAAGCTCACATCATGAATGTCAGCTGGTCGGCAGACCACCGGATCATCGACGGGGCCACAATGGCGCGGTTCTCGAACCTGTGGAGGGACTACCTGGAGAACCCAGCATCAATGGTCCTGGACCTAAAATGAGCCTGCGGCACCCTGGACGGCCTCCTCTGGATGGAGCTCTGCGACGCAAAACCAGTCACCATGATTATGTGAAAATGGTCTACTGTACTCTGACTCTCTGGGTAGTCACATTGACTGGGTGTTACTGGTCCCCATACTGCTCCCGCCTCCTTGGCCTTCCAAAACCTTTCTTTCTCAGAATATGAATGGCTGCACATGCCACAGACACTACAAGTTACCTACTACTCAACATTGTGAAACTAATATCTAGTTGCAGGCTGTTTTATCTTTGTGTGTGGCCTTAGTTTTATTTCTCTCTTCCGGTTGCCTTACTGACATAGGATGGTTAGGAACAGTAGCGCTTTTTGCTGAAGAGCTGAATTTTGGAAAACAAACCTGCTCTATTTCTGAAATACTGTATGGCTCTGTAAAAAAAGGCCCTGCACCTTTAAGGGTATTGGTGCCGAAACCAGGGAATAACCTTAAAGGTGCAAggcctttttaatttttttttatggcCCCACACAttcccacagcaacactagaaaGCTCTTTTCAAGAGAATGTGTGATTTAGTGATTCCCCTTGAAAAGCATCATTGCACAACATGCACTTGTGAGTGTACACATCTGCTATGAGTGGACATAAGGCTCCTACAATAGCTCCACAATTGTTAGTTTGATCAATTTATCTGTTACAGTTGCTGCTTTTCTAGAAAAGCAGTATCTGCTTTTATTGCTGTCAGATAATGTATTGCTTTAAAAAGAAAGTATAAAGTTATGGTTGGAAGTGAACACCCAGTGTTGTGCATTATATGTTCCCCAAGACTCGTGAAGCTCATTATTTTGGCAAAATAAAGCCTTTCATTTATCTA

Function

symbol description
dbt Predicted to enable acetyltransferase activity and lipoic acid binding activity. Acts upstream of or within branched-chain amino acid metabolic process. Predicted to be active in mitochondrion. Is expressed in brain; gut; intestine; liver; and muscle. Used to study maple syrup urine disease. Human ortholog(s) of this gene implicated in maple syrup urine disease. Orthologous to human DBT (dihydrolipoamide branched chain transacylase E2).

NR:

description
lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial-like

GO:

id name namespace
GO:0009081 branched-chain amino acid metabolic process biological_process
GO:0046949 fatty-acyl-CoA biosynthetic process biological_process
GO:0048037 obsolete cofactor binding molecular_function
GO:0043754 dihydrolipoyllysine-residue (2-methylpropanoyl)transferase activity molecular_function

KEGG:

id description
K09699 DBT, bkdB; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021562052.2 False 2438 mRNA 0.50 11 15425122 15432764
XM_036950356.1 True 2462 mRNA 0.50 11 15425122 15432764

Neighbor

gene id symbol gene type direction distance location
LOC110529632 dph5 coding upstream 183956 15192649 ~ 15241166 (+)
LOC110488261 antithrombin coding upstream 253707 15163316 ~ 15171415 (+)
LOC110488062 LOC106613585 coding upstream 265650 15130526 ~ 15159472 (+)
LOC110529430 LOC106574078 coding upstream 299120 15117850 ~ 15126002 (+)
LOC110487930 LOC106574072 coding upstream 344818 15075184 ~ 15080304 (+)
lrrc39 lrrc39 coding downstream 325 15433089 ~ 15437025 (+)
sass6 sass6 coding downstream 14694 15447458 ~ 15468011 (+)
LOC110489630 LOC106573979 coding downstream 75998 15508762 ~ 15521789 (+)
LOC118944451 NA coding downstream 119351 15552115 ~ 15555470 (+)
LOC110489937 mepd coding downstream 162549 15595313 ~ 15606479 (+)
G13956 NA non-coding upstream 3317 15421591 ~ 15421805 (+)
G13908 NA non-coding upstream 11877 15340394 ~ 15413245 (+)
G13907 NA non-coding upstream 82502 15342280 ~ 15342620 (+)
G13890 NA non-coding upstream 101154 15317312 ~ 15323968 (+)
G13865 NA non-coding upstream 142259 15282659 ~ 15282863 (+)
G14359 NA non-coding downstream 95566 15528330 ~ 15528643 (+)
G14365 NA non-coding downstream 98237 15531001 ~ 15531361 (+)
G14415 NA non-coding downstream 178309 15611073 ~ 15611634 (+)
G14417 NA non-coding downstream 182541 15615305 ~ 15615517 (+)
G13639 NA other upstream 463119 14961554 ~ 14962003 (+)
G13434 NA other upstream 612498 14811771 ~ 14812624 (+)
G13391 NA other upstream 724392 14700176 ~ 14700730 (+)
G13381 NA other upstream 745095 14679698 ~ 14680027 (+)
G13380 NA other upstream 745544 14679350 ~ 14679578 (+)
LOC110490510 LOC106573976 other downstream 262277 15694810 ~ 15716774 (+)
LOC118941201 NA other downstream 1146322 16578956 ~ 16592967 (+)
LOC110492606 LOC106573909 other downstream 1483735 16916482 ~ 16920945 (+)
LOC110492876 LOC106613263 other downstream 1530293 16962997 ~ 16967790 (+)

Expression


Co-expression Network